Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2731

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
3,069,597	+				-0.1
3,069,598	-				-0.1
3,069,598	-				-0.1
3,069,599	+				-1.4
3,069,599	+				-0.1
3,069,599	+				-0.1
3,069,600	-				-0.1
3,069,600	-				-1.2
3,069,600	-				-0.1
3,069,605	+				-0.1
3,069,656	+				-0.1
3,069,816	-		Pf1N1B4_2730	0.21	-3.1
3,069,962	+		Pf1N1B4_2730	0.42	-0.1
3,070,010	+				-0.1
3,070,010	+		Pf1N1B4_2730	0.49	-0.1
3,070,010	+		Pf1N1B4_2730	0.49	-1.1
3,070,010	+		Pf1N1B4_2730	0.49	-1.5
3,070,010	+		Pf1N1B4_2730	0.49	-1.4
3,070,011	-		Pf1N1B4_2730	0.50	-0.1
3,070,163	+		Pf1N1B4_2730	0.72	-1.2
3,070,163	+		Pf1N1B4_2730	0.72	-0.1
3,070,163	+		Pf1N1B4_2730	0.72	-0.7
3,070,163	+		Pf1N1B4_2730	0.72	-2.7
3,070,163	+		Pf1N1B4_2730	0.72	-0.1
3,070,163	+		Pf1N1B4_2730	0.72	-0.1
3,070,164	-		Pf1N1B4_2730	0.72	-0.1
3,070,164	-		Pf1N1B4_2730	0.72	-0.1
3,070,164	-		Pf1N1B4_2730	0.72	-1.5
3,070,164	-		Pf1N1B4_2730	0.72	-0.1
3,070,164	-		Pf1N1B4_2730	0.72	-1.1
3,070,164	-		Pf1N1B4_2730	0.72	-0.1
3,070,165	+		Pf1N1B4_2730	0.72	-0.1
3,070,165	+		Pf1N1B4_2730	0.72	-0.1
3,070,192	+		Pf1N1B4_2730	0.76	-1.9
3,070,192	+		Pf1N1B4_2730	0.76	-0.1
3,070,193	-		Pf1N1B4_2730	0.77	-0.1
3,070,193	-		Pf1N1B4_2730	0.77	-0.1
3,070,193	-		Pf1N1B4_2730	0.77	-0.1
3,070,193	-		Pf1N1B4_2730	0.77	-0.1
3,070,316	+				-0.1
3,070,316	+				-0.1
3,070,316	+				-0.1
3,070,317	-				-1.1
3,070,317	-				-0.1
3,070,317	-				-0.1
3,070,317	-				-0.1
3,070,317	-				-0.1
3,070,317	-				-0.1
3,070,333	+				-0.1
3,070,334	-				-1.1
3,070,334	-				-0.1
3,070,334	-				-0.1
3,070,334	-				-0.1
3,070,334	-				-0.1
3,070,334	-				-0.9
3,070,334	-				-0.1
3,070,334	-				-1.0
3,070,334	-				-0.1
3,070,388	+				-0.1
3,070,418	+				-1.7
3,070,418	+				-0.1
3,070,418	+				-1.6
3,070,418	+				-1.7
3,070,419	-				-0.1
3,070,419	-				-0.1
3,070,419	-				-0.1
3,070,452	-				-0.1
3,070,503	+				-1.2
3,070,517	+				-0.1
3,070,517	+				-0.1
3,070,517	+				-0.1
3,070,517	+				-1.2
3,070,517	+				-0.1
3,070,518	-				-1.3
3,070,518	-				-0.1
3,070,665	-		Pf1N1B4_2731	0.18	-0.1
3,070,665	-		Pf1N1B4_2731	0.18	-2.3
3,070,973	+		Pf1N1B4_2731	0.59	-2.4
3,070,974	-		Pf1N1B4_2731	0.59	-0.1
3,070,974	-		Pf1N1B4_2731	0.59	-1.8
3,070,974	-		Pf1N1B4_2731	0.59	-0.1
3,070,974	-		Pf1N1B4_2731	0.59	-0.1
3,071,072	-		Pf1N1B4_2731	0.72	-0.1
3,071,191	+		Pf1N1B4_2731	0.88	-0.1
3,071,192	-		Pf1N1B4_2731	0.88	-1.6
3,071,192	-		Pf1N1B4_2731	0.88	-0.1
3,071,192	-		Pf1N1B4_2731	0.88	-0.1
3,071,228	+				-0.1
3,071,229	-				-0.1
3,071,229	-				-0.1
3,071,229	-				-1.7
3,071,230	+				-1.8
3,071,355	+				-0.1
3,071,355	+				-1.7
3,071,355	+				-0.1
3,071,356	-				-0.1
3,071,420	+				-0.1
3,071,420	+				-1.7
3,071,420	+				-0.1
3,071,420	+				-2.5
3,071,420	+				-1.6
3,071,420	+				-0.1
3,071,420	+				-1.5
3,071,420	+				-0.1
3,071,420	+				-0.7
3,071,421	-				-0.5
3,071,421	-				-0.1
3,071,421	-				-0.1
3,071,421	-				-0.1
3,071,421	-				-2.1
3,071,421	-				-0.1
3,071,421	-				-0.1
3,071,421	-				+0.9
3,071,463	+				-0.1
3,071,463	+				-0.1
3,071,464	-				-0.1
3,071,464	-				-0.1
3,071,464	-				-1.2
3,071,464	-				-0.1
3,071,464	-				-0.1
3,071,464	-				-1.4
3,071,466	+				-0.1
3,071,466	+				-2.3
3,071,466	+				-0.1
3,071,466	+				-0.1
3,071,466	+				-0.1
3,071,466	+				-0.0
3,071,466	+				-0.1
3,071,467	-				-0.1
3,071,467	-				-1.7
3,071,467	-				-0.1
3,071,467	-				-0.1
3,071,467	-				-0.1
3,071,467	-				-0.1
3,071,467	-				-1.9
3,071,467	-				-0.3
3,071,485	-		Pf1N1B4_2732	0.13	-2.4
3,071,502	+		Pf1N1B4_2732	0.16	-0.7
3,071,502	+		Pf1N1B4_2732	0.16	-0.1
3,071,503	-		Pf1N1B4_2732	0.16	-0.1
3,071,528	+		Pf1N1B4_2732	0.22	-0.1
3,071,528	+		Pf1N1B4_2732	0.22	-0.1
3,071,529	-		Pf1N1B4_2732	0.22	-1.7
3,071,529	-		Pf1N1B4_2732	0.22	-0.1
3,071,553	+		Pf1N1B4_2732	0.27	-2.5
3,071,553	+		Pf1N1B4_2732	0.27	-0.1
3,071,553	+				-0.1
3,071,554	-		Pf1N1B4_2732	0.27	-0.1
3,071,554	-				-0.1
3,071,554	-		Pf1N1B4_2732	0.27	-0.1
3,071,554	-		Pf1N1B4_2732	0.27	-0.1
3,071,554	-		Pf1N1B4_2732	0.27	+0.9
3,071,554	-		Pf1N1B4_2732	0.27	-0.3
3,071,554	-				-0.1
3,071,554	-		Pf1N1B4_2732	0.27	-0.1
3,071,554	-		Pf1N1B4_2732	0.27	-0.1
3,071,554	-		Pf1N1B4_2732	0.27	-0.1
3,071,643	+		Pf1N1B4_2732	0.46	-1.5
3,071,643	+		Pf1N1B4_2732	0.46	-0.1
3,071,643	+		Pf1N1B4_2732	0.46	-0.1
3,071,643	+		Pf1N1B4_2732	0.46	-4.2
3,071,644	-		Pf1N1B4_2732	0.46	-0.6
3,071,644	-		Pf1N1B4_2732	0.46	-0.1
3,071,644	-		Pf1N1B4_2732	0.46	-2.0
3,071,644	-		Pf1N1B4_2732	0.46	-2.3
3,071,790	-		Pf1N1B4_2732	0.76	-1.3
3,071,936	+				-0.1
3,071,936	+				-0.1
3,071,936	+				-0.1
3,071,937	-				-1.0
3,072,081	+		Pf1N1B4_2733	0.25	-0.1
3,072,082	-				-2.3
3,072,082	-		Pf1N1B4_2733	0.25	-0.1
3,072,082	-		Pf1N1B4_2733	0.25	-2.5
3,072,223	+		Pf1N1B4_2733	0.49	-1.5
3,072,224	-		Pf1N1B4_2733	0.49	-0.1