Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2727

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
3,064,378	+				-3.6
3,064,378	+				-0.1
3,064,378	+				-0.1
3,064,378	+				-1.1
3,064,378	+				-0.1
3,064,378	+				-1.1
3,064,378	+				-0.1
3,064,378	+				-0.1
3,064,378	+				-0.1
3,064,378	+				-0.1
3,064,378	+				-0.1
3,064,378	+				-0.1
3,064,379	-				-0.1
3,064,379	-				-1.6
3,064,379	-				-0.1
3,064,379	-				-0.1
3,064,379	-				+0.9
3,064,381	-				-0.1
3,064,381	-				-0.1
3,064,381	-				-0.1
3,064,407	+				-0.1
3,064,407	+				-1.8
3,064,435	+				-1.7
3,064,435	+				-0.1
3,064,436	-				-2.0
3,064,436	-				-0.1
3,064,436	-				-0.1
3,064,477	+				-0.1
3,064,477	+				-0.9
3,064,477	+				-1.6
3,064,478	-				-0.1
3,064,478	-				-1.1
3,064,728	+		Pf1N1B4_2726	0.36	-0.1
3,064,728	+		Pf1N1B4_2726	0.36	-0.1
3,064,728	+		Pf1N1B4_2726	0.36	-1.5
3,064,728	+		Pf1N1B4_2726	0.36	-0.1
3,064,729	-		Pf1N1B4_2726	0.36	-0.1
3,065,110	-		Pf1N1B4_2726	0.79	-0.1
3,065,110	-		Pf1N1B4_2726	0.79	-0.1
3,065,267	+				-0.1
3,065,299	+				-0.1
3,065,299	+				-0.1
3,065,299	+				-0.1
3,065,300	-				-0.1
3,065,300	-				-0.1
3,065,300	-				-1.9
3,065,300	-				-2.8
3,065,440	+		Pf1N1B4_2727	0.26	-0.1
3,065,440	+		Pf1N1B4_2727	0.26	-0.1
3,065,441	-		Pf1N1B4_2727	0.26	-0.1
3,065,441	-		Pf1N1B4_2727	0.26	-2.3
3,065,441	-		Pf1N1B4_2727	0.26	-0.1
3,065,533	-		Pf1N1B4_2727	0.48	-0.1
3,065,533	-		Pf1N1B4_2727	0.48	-3.6
3,065,533	-		Pf1N1B4_2727	0.48	-0.1
3,065,535	+		Pf1N1B4_2727	0.49	-0.1
3,065,535	+		Pf1N1B4_2727	0.49	-0.1
3,065,535	+		Pf1N1B4_2727	0.49	-0.1
3,065,536	-				-0.1
3,065,536	-		Pf1N1B4_2727	0.49	-0.1
3,065,588	-		Pf1N1B4_2727	0.61	-0.1
3,065,589	+		Pf1N1B4_2727	0.62	-0.1
3,065,589	+		Pf1N1B4_2727	0.62	-0.1
3,065,589	+		Pf1N1B4_2727	0.62	-0.1
3,065,590	-		Pf1N1B4_2727	0.62	-0.1
3,065,590	-		Pf1N1B4_2727	0.62	-0.1
3,065,717	+				-0.1
3,065,717	+				-0.1
3,065,717	+				-0.1
3,065,797	+				-1.4
3,065,797	+				-0.1
3,065,797	+				-1.7
3,065,797	+				-1.7
3,065,798	-				-0.1
3,065,798	-				-3.1
3,065,798	-				-0.1
3,065,819	-				-0.9
3,065,820	+				-0.1
3,065,820	+				-0.1
3,065,820	+				-0.1
3,065,821	-				-0.1
3,065,821	-				-0.1
3,065,821	-				-1.1
3,065,821	-				-0.1
3,065,821	-				-0.1
3,065,900	+				-0.1
3,066,314	-		Pf1N1B4_2728	0.19	-0.1
3,066,314	-		Pf1N1B4_2728	0.19	-0.1
3,066,314	-		Pf1N1B4_2728	0.19	-0.1
3,066,314	-		Pf1N1B4_2728	0.19	-0.1
3,066,396	+		Pf1N1B4_2728	0.22	-0.7
3,066,397	-		Pf1N1B4_2728	0.22	-0.1
3,066,443	+		Pf1N1B4_2728	0.24	-0.1