Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2252

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
2,567,409	+		Pf1N1B4_2250	0.87	-1.4
2,567,409	+		Pf1N1B4_2250	0.87	-2.0
2,567,409	+		Pf1N1B4_2250	0.87	+1.0
2,567,671	+		Pf1N1B4_2251	0.20	-0.0
2,567,671	+		Pf1N1B4_2251	0.20	-2.1
2,567,672	-		Pf1N1B4_2251	0.20	-0.0
2,568,293	-				-0.0
2,568,314	+				-1.7
2,568,315	-				-2.7
2,568,315	-				-2.2
2,568,315	-				-0.0
2,568,319	+				-1.2
2,568,319	+				-2.4
2,568,319	+				-0.0
2,568,320	-				-0.0
2,568,320	-				-0.0
2,568,320	-				-0.0
2,568,320	-				-0.0
2,568,320	-				-0.0
2,568,356	+				-1.6
2,568,357	-				-0.0
2,568,357	-				-2.8
2,568,378	-		Pf1N1B4_2252	0.12	-0.0
2,568,474	-		Pf1N1B4_2252	0.57	-2.3
2,568,520	+		Pf1N1B4_2252	0.78	-2.4
2,568,520	+		Pf1N1B4_2252	0.78	-0.0
2,568,520	+		Pf1N1B4_2252	0.78	-0.0
2,568,521	-		Pf1N1B4_2252	0.79	-0.0
2,568,564	+				-1.2
2,568,564	+				-0.0
2,568,564	+				-0.0
2,568,564	+				-1.3
2,568,564	+				-0.0
2,568,565	-				-1.2
2,568,576	+				-0.0
2,568,741	+				-4.4
2,568,742	-				-0.0
2,568,742	-				-0.0
2,568,742	-				-0.0
2,568,754	-				-0.0
2,568,754	-				-2.5
2,568,754	-				-0.0
2,568,765	+				-1.0
2,568,765	+				-0.4
2,568,766	-				-1.5
2,568,766	-				-0.0
2,568,766	-				-2.3
2,568,840	+		Pf1N1B4_2253	0.19	+1.0
2,568,840	+		Pf1N1B4_2253	0.19	-3.2
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+		Pf1N1B4_2253	0.19	-1.1
2,568,840	+		Pf1N1B4_2253	0.19	-1.8
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+				-1.4
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+		Pf1N1B4_2253	0.19	-0.9
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,841	-		Pf1N1B4_2253	0.19	-0.0
2,568,841	-		Pf1N1B4_2253	0.19	-2.3
2,568,841	-		Pf1N1B4_2253	0.19	-3.7
2,568,841	-		Pf1N1B4_2253	0.19	-0.0
2,568,841	-		Pf1N1B4_2253	0.19	-2.0
2,568,841	-				-3.5
2,568,841	-		Pf1N1B4_2253	0.19	-0.0
2,568,841	-		Pf1N1B4_2253	0.19	-0.0
2,568,841	-		Pf1N1B4_2253	0.19	-0.0
2,569,035	+		Pf1N1B4_2253	0.50	-0.0
2,569,035	+		Pf1N1B4_2253	0.50	-0.0
2,569,035	+		Pf1N1B4_2253	0.50	-0.0
2,569,036	-		Pf1N1B4_2253	0.50	-1.6
2,569,233	+		Pf1N1B4_2253	0.81	-0.0
2,569,381	+				-0.0
2,569,381	+				-0.0
2,569,381	+				-0.0
2,569,382	-				-2.1
2,569,382	-				-2.4
2,569,382	-				-0.0
2,569,429	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-0.0
2,569,464	+				-2.0
2,569,464	+				-0.0
2,569,464	+				-2.7
2,569,464	+				-1.2
2,569,465	-				-0.0
2,569,465	-				-0.0
2,569,465	-				-1.5
2,569,465	-				-0.0
2,569,465	-				-0.0
2,569,465	-				-0.9
2,569,465	-				-1.9
2,569,465	-				-0.0
2,569,465	-				-0.0
2,569,465	-				-0.0
2,569,465	-				-0.0
2,569,465	-				-0.0
2,569,465	-				-2.1
2,569,465	-				-1.6
2,569,465	-				-0.0
2,569,494	-				-0.0
2,569,524	+				-0.0
2,569,524	+				-0.0
2,569,545	+				-0.0