Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2083

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
2,383,363	+		Pf1N1B4_2082	0.57	-0.7
2,383,364	-		Pf1N1B4_2082	0.57	-2.5
2,383,364	-		Pf1N1B4_2082	0.57	+0.0
2,383,379	+		Pf1N1B4_2082	0.58	-2.6
2,383,379	+				+0.0
2,383,379	+		Pf1N1B4_2082	0.58	-0.9
2,383,433	+		Pf1N1B4_2082	0.62	-0.9
2,383,434	-		Pf1N1B4_2082	0.62	+0.0
2,383,434	-		Pf1N1B4_2082	0.62	+0.0
2,383,822	+		Pf1N1B4_2082	0.87	+0.0
2,383,823	-		Pf1N1B4_2082	0.87	+0.0
2,383,866	-		Pf1N1B4_2082	0.89	+0.0
2,383,866	-		Pf1N1B4_2082	0.89	+0.0
2,383,929	+				+0.0
2,383,929	+				-3.0
2,383,929	+				+0.0
2,383,930	-				+0.0
2,383,930	-				+1.0
2,383,987	+				-1.7
2,384,021	+				+0.0
2,384,030	-				+0.0
2,384,030	-				+0.0
2,384,102	+				+0.0
2,384,164	+		Pf1N1B4_2083	0.20	-2.3
2,384,164	+		Pf1N1B4_2083	0.20	+0.0
2,384,164	+		Pf1N1B4_2083	0.20	+0.0
2,384,164	+		Pf1N1B4_2083	0.20	+0.0
2,384,165	-		Pf1N1B4_2083	0.20	-2.3
2,384,181	+		Pf1N1B4_2083	0.23	-2.1
2,384,182	-		Pf1N1B4_2083	0.23	+0.0
2,384,182	-		Pf1N1B4_2083	0.23	+0.0
2,384,182	-		Pf1N1B4_2083	0.23	+0.0
2,384,574	-				+0.0
2,384,625	+				+0.0
2,384,641	+				-2.0
2,384,641	+				-1.1
2,384,641	+				+0.0
2,384,699	-				-1.6
2,385,010	+		Pf1N1B4_2084	0.28	-0.0
2,385,010	+		Pf1N1B4_2084	0.28	-1.7
2,385,010	+		Pf1N1B4_2084	0.28	-0.0
2,385,011	-		Pf1N1B4_2084	0.28	-0.0
2,385,022	+		Pf1N1B4_2084	0.29	-0.0
2,385,022	+		Pf1N1B4_2084	0.29	-0.0
2,385,022	+		Pf1N1B4_2084	0.29	-0.0
2,385,023	-		Pf1N1B4_2084	0.29	-0.0
2,385,023	-		Pf1N1B4_2084	0.29	-3.4
2,385,023	-		Pf1N1B4_2084	0.29	+1.0
2,385,023	-		Pf1N1B4_2084	0.29	-0.0
2,385,023	-		Pf1N1B4_2084	0.29	-0.0
2,385,079	+		Pf1N1B4_2084	0.33	-0.0
2,385,079	+		Pf1N1B4_2084	0.33	-0.4
2,385,079	+		Pf1N1B4_2084	0.33	-1.7
2,385,080	-		Pf1N1B4_2084	0.33	-1.9
2,385,080	-		Pf1N1B4_2084	0.33	-0.0
2,385,082	+		Pf1N1B4_2084	0.33	-0.0
2,385,082	+		Pf1N1B4_2084	0.33	-0.0
2,385,082	+				-0.9
2,385,082	+		Pf1N1B4_2084	0.33	-1.0
2,385,082	+		Pf1N1B4_2084	0.33	-0.0
2,385,082	+		Pf1N1B4_2084	0.33	-0.9
2,385,082	+		Pf1N1B4_2084	0.33	-1.2
2,385,082	+		Pf1N1B4_2084	0.33	-0.0
2,385,082	+		Pf1N1B4_2084	0.33	-0.0
2,385,083	-		Pf1N1B4_2084	0.33	-1.0
2,385,083	-		Pf1N1B4_2084	0.33	-0.0
2,385,083	-		Pf1N1B4_2084	0.33	-0.0
2,385,083	-		Pf1N1B4_2084	0.33	-0.0
2,385,083	-		Pf1N1B4_2084	0.33	-0.0
2,385,083	-		Pf1N1B4_2084	0.33	-0.0
2,385,083	-				-0.8
2,385,121	+		Pf1N1B4_2084	0.36	-0.0
2,385,121	+		Pf1N1B4_2084	0.36	-1.0
2,385,121	+		Pf1N1B4_2084	0.36	-0.0
2,385,122	-		Pf1N1B4_2084	0.36	-0.0
2,385,122	-		Pf1N1B4_2084	0.36	-1.3
2,385,122	-		Pf1N1B4_2084	0.36	-0.0
2,385,122	-				-2.4
2,385,122	-		Pf1N1B4_2084	0.36	-0.0
2,385,122	-		Pf1N1B4_2084	0.36	-2.0
2,385,373	+		Pf1N1B4_2084	0.53	-2.0
2,385,374	-		Pf1N1B4_2084	0.53	-2.0
2,385,374	-		Pf1N1B4_2084	0.53	-0.0
2,385,406	+		Pf1N1B4_2084	0.55	-0.0
2,385,406	+		Pf1N1B4_2084	0.55	-0.0
2,385,406	+		Pf1N1B4_2084	0.55	-0.0
2,385,406	+		Pf1N1B4_2084	0.55	-1.2
2,385,407	-		Pf1N1B4_2084	0.55	-0.0
2,385,407	-		Pf1N1B4_2084	0.55	-0.0
2,385,407	-		Pf1N1B4_2084	0.55	-0.0
2,385,428	-		Pf1N1B4_2084	0.56	-0.0