Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2054

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
2,343,026	-		Pf1N1B4_2053	0.77	-0.0
2,343,026	-		Pf1N1B4_2053	0.77	-0.0
2,343,381	-		Pf1N1B4_2053	0.86	-0.0
2,343,381	-		Pf1N1B4_2053	0.86	-0.0
2,343,381	-		Pf1N1B4_2053	0.86	-0.0
2,343,577	+				-0.0
2,343,577	+				-0.0
2,343,577	+				-0.0
2,343,577	+				-0.0
2,343,577	+				-0.0
2,343,578	-				-0.0
2,343,578	-				-0.0
2,343,578	-				-2.6
2,343,707	+				-0.0
2,343,707	+				-1.6
2,343,707	+				-1.8
2,343,708	-				-1.8
2,343,708	-				-0.0
2,343,708	-				-0.0
2,344,111	+		Pf1N1B4_2054	0.20	-2.3
2,344,111	+		Pf1N1B4_2054	0.20	+1.0
2,344,112	-		Pf1N1B4_2054	0.20	-2.2
2,344,112	-		Pf1N1B4_2054	0.20	-0.0
2,344,112	-		Pf1N1B4_2054	0.20	-0.0
2,344,453	+				-0.0
2,344,453	+				-0.0
2,344,454	-				-1.9
2,344,624	+				-1.2
2,344,624	+				-0.0
2,344,624	+				-0.0
2,344,625	-				-1.4
2,344,625	-				-1.1
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+				-2.1
2,344,729	+		Pf1N1B4_2055	0.13	-0.7
2,344,729	+		Pf1N1B4_2055	0.13	-1.2
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,730	-		Pf1N1B4_2055	0.13	-0.0
2,344,730	-		Pf1N1B4_2055	0.13	-0.0
2,344,730	-		Pf1N1B4_2055	0.13	-0.0
2,344,730	-		Pf1N1B4_2055	0.13	-1.6
2,344,730	-				-2.1
2,344,730	-		Pf1N1B4_2055	0.13	-0.8
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-2.4
2,344,918	+		Pf1N1B4_2055	0.23	-2.9
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,919	-		Pf1N1B4_2055	0.23	-2.9
2,344,919	-		Pf1N1B4_2055	0.23	-0.0
2,345,060	-		Pf1N1B4_2055	0.30	-0.0
2,345,230	+		Pf1N1B4_2055	0.39	-0.0
2,345,230	+		Pf1N1B4_2055	0.39	-1.6
2,345,230	+		Pf1N1B4_2055	0.39	-0.0
2,345,321	+		Pf1N1B4_2055	0.43	-0.0
2,345,351	-		Pf1N1B4_2055	0.45	-0.0
2,345,440	+		Pf1N1B4_2055	0.50	-2.3
2,345,440	+		Pf1N1B4_2055	0.50	-0.0
2,345,440	+		Pf1N1B4_2055	0.50	-0.0
2,345,441	-		Pf1N1B4_2055	0.50	-0.0
2,345,441	-		Pf1N1B4_2055	0.50	-0.0
2,345,441	-		Pf1N1B4_2055	0.50	-0.0
2,345,441	-		Pf1N1B4_2055	0.50	-2.1
2,345,441	-		Pf1N1B4_2055	0.50	-0.0
2,345,443	+		Pf1N1B4_2055	0.50	-0.0