Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2035

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
2,321,726	+				-0.0
2,321,726	+				-0.0
2,321,727	-				-0.0
2,321,796	+				-0.0
2,321,796	+				-1.9
2,321,796	+				+1.0
2,321,796	+				-2.2
2,321,797	-				-0.0
2,321,797	-				-2.7
2,321,797	-				-0.0
2,321,797	-				-0.5
2,321,797	-				-0.0
2,321,797	-				-0.0
2,321,797	-				-0.0
2,321,797	-				-0.0
2,321,799	+				-1.7
2,321,799	+				-0.0
2,321,799	+				-0.0
2,321,799	+				-1.4
2,321,815	+				-0.0
2,321,897	+				-2.6
2,321,897	+				-0.0
2,321,897	+				-0.0
2,321,897	+				-0.0
2,321,897	+				-0.0
2,321,898	-				-2.3
2,321,898	-				-0.0
2,321,898	-				-0.0
2,321,898	-				-0.0
2,321,929	-				-0.0
2,322,027	+				-2.3
2,322,027	+				-0.0
2,322,110	-				-2.3
2,322,590	+		Pf1N1B4_2035	0.24	-0.0
2,322,839	+		Pf1N1B4_2035	0.35	-2.1
2,323,343	+		Pf1N1B4_2035	0.57	-0.0
2,323,344	-		Pf1N1B4_2035	0.57	-1.8
2,323,358	+		Pf1N1B4_2035	0.57	-0.0
2,323,358	+		Pf1N1B4_2035	0.57	-0.0
2,323,448	+		Pf1N1B4_2035	0.61	-0.0
2,323,502	+		Pf1N1B4_2035	0.64	-1.9
2,323,503	-		Pf1N1B4_2035	0.64	-3.9
2,323,610	+		Pf1N1B4_2035	0.68	-2.3
2,323,787	+		Pf1N1B4_2035	0.76	-0.0
2,323,787	+		Pf1N1B4_2035	0.76	-0.0
2,323,799	+		Pf1N1B4_2035	0.77	-0.0
2,323,865	+		Pf1N1B4_2035	0.80	+1.0
2,323,865	+		Pf1N1B4_2035	0.80	-0.0
2,323,865	+		Pf1N1B4_2035	0.80	-2.0
2,323,865	+		Pf1N1B4_2035	0.80	-0.0
2,323,866	-		Pf1N1B4_2035	0.80	-2.0
2,323,928	+		Pf1N1B4_2035	0.82	-3.8
2,323,929	-		Pf1N1B4_2035	0.82	-3.0
2,323,929	-		Pf1N1B4_2035	0.82	-0.0
2,324,318	+				-0.0
2,324,330	+				-4.8
2,324,339	+				-1.6
2,324,339	+				-0.0
2,324,339	+				-0.0
2,324,339	+				-0.0
2,324,339	+				-0.8
2,324,339	+				-0.0
2,325,194	+		Pf1N1B4_2036	0.51	-3.1
2,325,195	-				-0.0