Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34080

Experiment: L-Isoleucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (N)
3,571,850	+		PGA1_c34070	0.43	-0.6
3,571,850	-		PGA1_c34070	0.43	+0.1
3,571,850	-		PGA1_c34070	0.43	-0.6
3,571,858	-		PGA1_c34070	0.44	+0.6
3,571,941	+		PGA1_c34070	0.49	-0.2
3,571,958	+		PGA1_c34070	0.51	-0.6
3,572,028	+		PGA1_c34070	0.55	-0.9
3,572,038	+		PGA1_c34070	0.56	+1.0
3,572,068	-		PGA1_c34070	0.58	+0.3
3,572,086	+		PGA1_c34070	0.59	+1.1
3,572,096	+		PGA1_c34070	0.60	-0.7
3,572,101	+		PGA1_c34070	0.60	+0.1
3,572,104	-		PGA1_c34070	0.60	-0.0
3,572,124	+		PGA1_c34070	0.62	-0.6
3,572,124	+		PGA1_c34070	0.62	-0.2
3,572,127	+		PGA1_c34070	0.62	-0.8
3,572,135	-		PGA1_c34070	0.62	-0.7
3,572,142	+		PGA1_c34070	0.63	+0.7
3,572,150	-		PGA1_c34070	0.63	-0.1
3,572,186	+		PGA1_c34070	0.66	+0.6
3,572,186	+		PGA1_c34070	0.66	+0.0
3,572,194	-		PGA1_c34070	0.66	-1.3
3,572,194	-		PGA1_c34070	0.66	+0.6
3,572,195	-		PGA1_c34070	0.66	+0.5
3,572,195	-		PGA1_c34070	0.66	+0.8
3,572,196	+		PGA1_c34070	0.66	+0.3
3,572,196	+		PGA1_c34070	0.66	+0.8
3,572,196	+		PGA1_c34070	0.66	+0.4
3,572,196	+		PGA1_c34070	0.66	+0.7
3,572,196	+		PGA1_c34070	0.66	-0.1
3,572,196	+		PGA1_c34070	0.66	-1.1
3,572,204	-		PGA1_c34070	0.67	+0.6
3,572,204	-		PGA1_c34070	0.67	+0.8
3,572,206	+		PGA1_c34070	0.67	+0.3
3,572,240	+		PGA1_c34070	0.69	+0.6
3,572,248	-		PGA1_c34070	0.70	+0.0
3,572,261	+		PGA1_c34070	0.71	+0.4
3,572,263	+		PGA1_c34070	0.71	+0.1
3,572,286	+		PGA1_c34070	0.72	+1.8
3,572,286	+		PGA1_c34070	0.72	+0.1
3,572,296	+		PGA1_c34070	0.73	+0.5
3,572,296	+		PGA1_c34070	0.73	-0.6
3,572,296	+		PGA1_c34070	0.73	-0.1
3,572,296	+		PGA1_c34070	0.73	+0.2
3,572,301	+		PGA1_c34070	0.73	+0.6
3,572,301	+		PGA1_c34070	0.73	+0.1
3,572,304	-		PGA1_c34070	0.74	-0.2
3,572,354	+		PGA1_c34070	0.77	+0.4
3,572,369	+		PGA1_c34070	0.78	-0.5
3,572,369	+		PGA1_c34070	0.78	+1.1
3,572,377	-		PGA1_c34070	0.78	+0.5
3,572,377	-		PGA1_c34070	0.78	-0.2
3,572,377	-		PGA1_c34070	0.78	+0.3
3,572,379	+		PGA1_c34070	0.79	+1.2
3,572,428	+		PGA1_c34070	0.82	-0.0
3,572,429	+		PGA1_c34070	0.82	+0.1
3,572,437	-		PGA1_c34070	0.82	+0.8
3,572,459	+		PGA1_c34070	0.84	-0.3
3,572,479	-		PGA1_c34070	0.85	+1.3
3,572,481	+		PGA1_c34070	0.85	-1.1
3,572,538	+		PGA1_c34070	0.89	+0.6
3,572,546	-		PGA1_c34070	0.90	+0.8
3,572,582	+				-0.2
3,572,663	+				+0.2
3,572,677	+				+0.8
3,572,706	-				+0.9
3,572,748	+				+0.1
3,572,756	-				-1.1
3,572,787	-				+1.0
3,572,805	-				+0.4
3,572,906	+				-0.7
3,572,989	+		PGA1_c34080	0.18	-0.2
3,572,989	+		PGA1_c34080	0.18	-1.9
3,572,997	-		PGA1_c34080	0.19	+0.3
3,572,997	-		PGA1_c34080	0.19	+0.0
3,572,997	-		PGA1_c34080	0.19	-0.4
3,572,997	-		PGA1_c34080	0.19	-0.6
3,572,997	-		PGA1_c34080	0.19	+0.0
3,573,019	+		PGA1_c34080	0.22	-1.7
3,573,088	-		PGA1_c34080	0.29	-0.4
3,573,191	+		PGA1_c34080	0.40	+0.1
3,573,191	+		PGA1_c34080	0.40	+0.5
3,573,199	-		PGA1_c34080	0.41	-0.2
3,573,199	-		PGA1_c34080	0.41	-0.1
3,573,235	+		PGA1_c34080	0.45	+0.1
3,573,237	+		PGA1_c34080	0.45	+0.7
3,573,300	-		PGA1_c34080	0.52	+1.3
3,573,334	+		PGA1_c34080	0.55	+0.8
3,573,339	+		PGA1_c34080	0.56	-1.5
3,573,362	+		PGA1_c34080	0.58	+1.2
3,573,370	-		PGA1_c34080	0.59	+0.4
3,573,380	-		PGA1_c34080	0.60	+1.3
3,573,449	+		PGA1_c34080	0.68	+0.7
3,573,449	+		PGA1_c34080	0.68	+0.5
3,573,454	+		PGA1_c34080	0.68	+1.0
3,573,454	+		PGA1_c34080	0.68	-0.2
3,573,457	-		PGA1_c34080	0.68	+1.3
3,573,457	-		PGA1_c34080	0.68	-0.2
3,573,457	-		PGA1_c34080	0.68	+0.4
3,573,457	-		PGA1_c34080	0.68	+0.5
3,573,457	-		PGA1_c34080	0.68	+0.8
3,573,457	-		PGA1_c34080	0.68	+0.5
3,573,457	-		PGA1_c34080	0.68	-0.6
3,573,457	-		PGA1_c34080	0.68	+0.1
3,573,457	-		PGA1_c34080	0.68	+0.1
3,573,459	+		PGA1_c34080	0.69	+1.1
3,573,477	+		PGA1_c34080	0.71	+0.1
3,573,492	+		PGA1_c34080	0.72	+1.2
3,573,492	+		PGA1_c34080	0.72	+1.5
3,573,492	+		PGA1_c34080	0.72	+0.2
3,573,495	-		PGA1_c34080	0.72	+0.0
3,573,497	+		PGA1_c34080	0.73	+0.2
3,573,500	-		PGA1_c34080	0.73	-0.5
3,573,505	+		PGA1_c34080	0.74	-0.1
3,573,538	-		PGA1_c34080	0.77	+0.4
3,573,549	+		PGA1_c34080	0.78	+0.6
3,573,558	-		PGA1_c34080	0.79	+1.0
3,573,604	-		PGA1_c34080	0.84	+1.5
3,573,611	-		PGA1_c34080	0.85	+0.2
3,573,611	-		PGA1_c34080	0.85	+0.6
3,573,611	-		PGA1_c34080	0.85	-0.3
3,573,657	-		PGA1_c34080	0.90	-1.0
3,573,747	+				+0.1
3,573,772	+				-1.9
3,573,808	+		PGA1_c34090	0.11	-0.3
3,573,809	+		PGA1_c34090	0.11	+0.4
3,573,817	-		PGA1_c34090	0.13	-0.3
3,573,847	-		PGA1_c34090	0.19	-0.5
3,573,860	+		PGA1_c34090	0.22	-0.2
3,573,860	+		PGA1_c34090	0.22	-0.0
3,573,902	+		PGA1_c34090	0.32	-0.8
3,573,927	+		PGA1_c34090	0.37	-1.3
3,573,927	+		PGA1_c34090	0.37	-0.3
3,573,936	-		PGA1_c34090	0.39	-0.0
3,574,055	-		PGA1_c34090	0.66	-0.9
3,574,085	+		PGA1_c34090	0.72	-0.0
3,574,085	+		PGA1_c34090	0.72	-1.9
3,574,085	+		PGA1_c34090	0.72	-0.4
3,574,085	+		PGA1_c34090	0.72	+0.7
3,574,088	-		PGA1_c34090	0.73	+1.0
3,574,090	+		PGA1_c34090	0.74	-0.6
3,574,098	-		PGA1_c34090	0.75	-0.0
3,574,099	-		PGA1_c34090	0.76	+0.6
3,574,113	+		PGA1_c34090	0.79	+1.1
3,574,121	-		PGA1_c34090	0.81	-0.2
3,574,165	-				+0.0
3,574,189	-				-0.4
3,574,202	+				-1.0
3,574,237	-				-0.9
3,574,244	+				-0.2
3,574,244	+				+0.5
3,574,252	-				-0.5
3,574,252	-				+1.0
3,574,252	-				+0.2
3,574,252	-				-1.7
3,574,252	-				-2.0
3,574,252	-				+1.1
3,574,252	-				+0.6
3,574,317	+				+1.3
3,574,415	-		PGA1_c34100	0.21	+0.5
3,574,429	+		PGA1_c34100	0.24	-1.0
3,574,437	+		PGA1_c34100	0.26	-0.2
3,574,463	+		PGA1_c34100	0.32	-0.4
3,574,473	+		PGA1_c34100	0.34	-0.6
3,574,473	+		PGA1_c34100	0.34	+0.4
3,574,487	+		PGA1_c34100	0.37	+0.6
3,574,531	+		PGA1_c34100	0.48	-0.0
3,574,541	-		PGA1_c34100	0.50	+0.4
3,574,543	-		PGA1_c34100	0.50	+1.7
3,574,551	+		PGA1_c34100	0.52	-1.2
3,574,553	-		PGA1_c34100	0.53	-0.1
3,574,610	+		PGA1_c34100	0.66	+0.3
3,574,610	+		PGA1_c34100	0.66	-1.4
3,574,610	+		PGA1_c34100	0.66	+0.0
3,574,622	+		PGA1_c34100	0.69	-0.7
3,574,630	-		PGA1_c34100	0.71	-0.5
3,574,634	+		PGA1_c34100	0.72	-1.4
3,574,642	-		PGA1_c34100	0.73	+0.1
3,574,655	+		PGA1_c34100	0.76	+0.6
3,574,663	-		PGA1_c34100	0.78	+0.0
3,574,665	+		PGA1_c34100	0.79	-0.9
3,574,665	+		PGA1_c34100	0.79	+2.8
3,574,687	+		PGA1_c34100	0.84	-0.2
3,574,739	+				-0.6
3,574,747	-				-0.1
3,574,747	-				+1.1
3,574,749	+				+0.3