Experiment: Dilute LB (1/10)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19095 and BWI76_RS19100 are separated by 997 nucleotides BWI76_RS19100 and BWI76_RS19105 are separated by 459 nucleotides
BWI76_RS19095: BWI76_RS19095 - hypothetical protein, at 3,966,460 to 3,967,893
_RS19095
BWI76_RS19100: BWI76_RS19100 - putative acid phosphatase, at 3,968,891 to 3,969,520
_RS19100
BWI76_RS19105: BWI76_RS19105 - GalU regulator GalF, at 3,969,980 to 3,970,876
_RS19105
Position (kb)
3968
3969
3970 Strain fitness (log2 ratio)
-2
-1
0
1 at 3967.951 kb on + strand at 3968.082 kb on - strand at 3968.121 kb on + strand at 3968.156 kb on - strand at 3968.162 kb on + strand at 3968.162 kb on + strand at 3968.162 kb on + strand at 3968.162 kb on + strand at 3968.170 kb on - strand at 3968.186 kb on + strand at 3968.186 kb on + strand at 3968.186 kb on + strand at 3968.194 kb on - strand at 3968.194 kb on - strand at 3968.194 kb on - strand at 3968.197 kb on - strand at 3968.197 kb on - strand at 3968.197 kb on - strand at 3968.197 kb on - strand at 3968.221 kb on - strand at 3968.259 kb on + strand at 3968.292 kb on + strand at 3968.302 kb on + strand at 3968.302 kb on + strand at 3968.304 kb on + strand at 3968.305 kb on - strand at 3968.312 kb on - strand at 3968.316 kb on + strand at 3968.316 kb on + strand at 3968.321 kb on - strand at 3968.332 kb on - strand at 3968.332 kb on - strand at 3968.337 kb on - strand at 3968.425 kb on + strand at 3968.470 kb on + strand at 3968.470 kb on + strand at 3968.470 kb on + strand at 3968.471 kb on + strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.478 kb on - strand at 3968.481 kb on + strand at 3968.500 kb on - strand at 3968.500 kb on - strand at 3968.500 kb on - strand at 3968.514 kb on - strand at 3968.530 kb on + strand at 3968.538 kb on - strand at 3968.546 kb on - strand at 3968.667 kb on - strand at 3968.673 kb on - strand at 3968.833 kb on + strand at 3968.834 kb on + strand at 3968.856 kb on + strand at 3968.873 kb on + strand at 3968.881 kb on - strand at 3968.883 kb on - strand at 3968.902 kb on - strand at 3968.906 kb on + strand at 3968.948 kb on - strand at 3968.953 kb on + strand at 3969.091 kb on + strand, within BWI76_RS19100 at 3969.347 kb on - strand, within BWI76_RS19100 at 3969.400 kb on - strand, within BWI76_RS19100 at 3969.410 kb on - strand, within BWI76_RS19100 at 3969.415 kb on - strand, within BWI76_RS19100 at 3969.470 kb on + strand at 3969.470 kb on + strand at 3969.478 kb on - strand at 3969.478 kb on - strand at 3969.478 kb on - strand at 3969.483 kb on - strand at 3969.582 kb on + strand at 3969.590 kb on - strand at 3969.618 kb on + strand at 3969.675 kb on + strand at 3969.887 kb on + strand at 3969.895 kb on - strand at 3969.897 kb on - strand at 3970.085 kb on + strand, within BWI76_RS19105 at 3970.092 kb on - strand, within BWI76_RS19105 at 3970.183 kb on + strand, within BWI76_RS19105 at 3970.183 kb on + strand, within BWI76_RS19105 at 3970.339 kb on + strand, within BWI76_RS19105 at 3970.384 kb on + strand, within BWI76_RS19105 at 3970.392 kb on - strand, within BWI76_RS19105 at 3970.432 kb on + strand, within BWI76_RS19105
Per-strain Table
Position Strand Gene LocusTag Fraction Dilute LB (1/10) remove 3,967,951 + -0.8 3,968,082 - +0.2 3,968,121 + -0.4 3,968,156 - +0.1 3,968,162 + -0.1 3,968,162 + +0.1 3,968,162 + -0.9 3,968,162 + -1.1 3,968,170 - +0.2 3,968,186 + -0.2 3,968,186 + -0.2 3,968,186 + +0.3 3,968,194 - -0.8 3,968,194 - -0.5 3,968,194 - -0.0 3,968,197 - -0.3 3,968,197 - -0.1 3,968,197 - -0.2 3,968,197 - -0.2 3,968,221 - -0.3 3,968,259 + -0.2 3,968,292 + -0.4 3,968,302 + -0.1 3,968,302 + -0.2 3,968,304 + -0.1 3,968,305 - -0.1 3,968,312 - -0.2 3,968,316 + -0.3 3,968,316 + +0.5 3,968,321 - -0.5 3,968,332 - +0.0 3,968,332 - -0.3 3,968,337 - -0.5 3,968,425 + -0.8 3,968,470 + -0.2 3,968,470 + +0.4 3,968,470 + -2.0 3,968,471 + +0.5 3,968,478 - -0.3 3,968,478 - -0.7 3,968,478 - -0.1 3,968,478 - +0.2 3,968,478 - +1.1 3,968,478 - -0.5 3,968,478 - -0.5 3,968,478 - -0.1 3,968,478 - +0.3 3,968,478 - -0.1 3,968,481 + -0.1 3,968,500 - -0.2 3,968,500 - -0.1 3,968,500 - -1.4 3,968,514 - -0.1 3,968,530 + -0.4 3,968,538 - -0.5 3,968,546 - +0.7 3,968,667 - +0.1 3,968,673 - +0.2 3,968,833 + +0.3 3,968,834 + +0.4 3,968,856 + +1.1 3,968,873 + +1.0 3,968,881 - +0.2 3,968,883 - -0.1 3,968,902 - +0.3 3,968,906 + +0.1 3,968,948 - -0.3 3,968,953 + -0.3 3,969,091 + BWI76_RS19100 0.32 -0.4 3,969,347 - BWI76_RS19100 0.72 -0.8 3,969,400 - BWI76_RS19100 0.81 -1.0 3,969,410 - BWI76_RS19100 0.82 -1.1 3,969,415 - BWI76_RS19100 0.83 -1.0 3,969,470 + -1.8 3,969,470 + -1.6 3,969,478 - -1.3 3,969,478 - -0.4 3,969,478 - -0.7 3,969,483 - -0.3 3,969,582 + -0.0 3,969,590 - +0.1 3,969,618 + -1.6 3,969,675 + -0.5 3,969,887 + +0.5 3,969,895 - +0.1 3,969,897 - +0.0 3,970,085 + BWI76_RS19105 0.12 +0.1 3,970,092 - BWI76_RS19105 0.12 +1.1 3,970,183 + BWI76_RS19105 0.23 -0.1 3,970,183 + BWI76_RS19105 0.23 +0.4 3,970,339 + BWI76_RS19105 0.40 +0.1 3,970,384 + BWI76_RS19105 0.45 +0.0 3,970,392 - BWI76_RS19105 0.46 +0.2 3,970,432 + BWI76_RS19105 0.50 +0.1
Or see this region's nucleotide sequence