Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2334 and Dshi_2335 are separated by 227 nucleotides Dshi_2335 and Dshi_2336 are separated by 77 nucleotides Dshi_2336 and Dshi_2337 are separated by 39 nucleotides Dshi_2337 and Dshi_2338 overlap by 4 nucleotides
Dshi_2334: Dshi_2334 - fumarate hydratase, class II (RefSeq), at 2,463,610 to 2,465,007
_2334
Dshi_2335: Dshi_2335 - arylsulfate sulfotransferase-like protein (RefSeq), at 2,465,235 to 2,465,534
_2335
Dshi_2336: Dshi_2336 - hypothetical protein (RefSeq), at 2,465,612 to 2,465,803
_2336
Dshi_2337: Dshi_2337 - cytochrome P450 (RefSeq), at 2,465,843 to 2,467,219
_2337
Dshi_2338: Dshi_2338 - hypothetical protein (RefSeq), at 2,467,216 to 2,468,406
_2338
Position (kb)
2465
2466
2467
2468 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2465.027 kb on + strand at 2465.344 kb on + strand, within Dshi_2335 at 2465.398 kb on - strand, within Dshi_2335 at 2465.549 kb on - strand at 2465.568 kb on - strand at 2465.741 kb on + strand, within Dshi_2336 at 2465.749 kb on - strand, within Dshi_2336 at 2465.798 kb on - strand at 2465.875 kb on + strand at 2466.048 kb on - strand, within Dshi_2337 at 2466.122 kb on - strand, within Dshi_2337 at 2466.300 kb on - strand, within Dshi_2337 at 2466.495 kb on + strand, within Dshi_2337 at 2466.688 kb on - strand, within Dshi_2337 at 2466.899 kb on - strand, within Dshi_2337 at 2466.927 kb on + strand, within Dshi_2337 at 2467.025 kb on + strand, within Dshi_2337 at 2467.091 kb on - strand at 2467.133 kb on + strand at 2467.268 kb on + strand at 2467.319 kb on + strand at 2467.330 kb on + strand at 2467.393 kb on - strand, within Dshi_2338 at 2467.441 kb on + strand, within Dshi_2338 at 2467.441 kb on + strand, within Dshi_2338 at 2467.535 kb on + strand, within Dshi_2338 at 2467.557 kb on - strand, within Dshi_2338 at 2467.594 kb on + strand, within Dshi_2338 at 2467.805 kb on - strand, within Dshi_2338 at 2467.810 kb on + strand, within Dshi_2338 at 2467.824 kb on - strand, within Dshi_2338 at 2467.877 kb on + strand, within Dshi_2338 at 2468.015 kb on + strand, within Dshi_2338 at 2468.109 kb on - strand, within Dshi_2338
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,465,027 + +0.4 2,465,344 + Dshi_2335 0.36 +0.8 2,465,398 - Dshi_2335 0.54 +1.0 2,465,549 - +1.2 2,465,568 - -0.2 2,465,741 + Dshi_2336 0.67 +0.2 2,465,749 - Dshi_2336 0.71 -0.7 2,465,798 - +0.2 2,465,875 + +0.4 2,466,048 - Dshi_2337 0.15 +0.2 2,466,122 - Dshi_2337 0.20 +0.7 2,466,300 - Dshi_2337 0.33 +2.8 2,466,495 + Dshi_2337 0.47 +0.4 2,466,688 - Dshi_2337 0.61 +0.4 2,466,899 - Dshi_2337 0.77 +0.8 2,466,927 + Dshi_2337 0.79 +1.0 2,467,025 + Dshi_2337 0.86 +0.1 2,467,091 - -0.2 2,467,133 + -0.2 2,467,268 + -1.1 2,467,319 + +0.9 2,467,330 + -0.0 2,467,393 - Dshi_2338 0.15 +0.5 2,467,441 + Dshi_2338 0.19 -1.2 2,467,441 + Dshi_2338 0.19 +0.7 2,467,535 + Dshi_2338 0.27 -0.1 2,467,557 - Dshi_2338 0.29 +0.2 2,467,594 + Dshi_2338 0.32 +0.3 2,467,805 - Dshi_2338 0.49 +0.6 2,467,810 + Dshi_2338 0.50 -1.0 2,467,824 - Dshi_2338 0.51 +0.9 2,467,877 + Dshi_2338 0.55 +0.9 2,468,015 + Dshi_2338 0.67 -0.1 2,468,109 - Dshi_2338 0.75 +0.3
Or see this region's nucleotide sequence