Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3221

Experiment: MoLS4 with N2 gas (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntatoC and DVU3221 overlap by 4 nucleotidesDVU3221 and pgi are separated by 27 nucleotides DVU3220: atoC - sigma-54 dependent transcriptional regulator/response regulator (TIGR), at 3,388,327 to 3,389,706 atoC DVU3221: DVU3221 - sensor histidine kinase (TIGR), at 3,389,703 to 3,391,229 DVU3221 DVU3222: pgi - glucose-6-phosphate isomerase (TIGR), at 3,391,257 to 3,392,600 pgi Position (kb) 3389 3390 3391 3392Strain fitness (log2 ratio) -1 0 1 2at 3391.278 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with N2 gas (N)
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3,391,278 - +2.4

Or see this region's nucleotide sequence