Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1113

Experiment: BG11 with nitrate 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with nitrate 25 mM
1,129,385	+				-0.4
1,129,387	-				-1.3
1,129,389	+				+0.7
1,129,430	+				-0.5
1,129,432	+				-1.3
1,129,432	-				-0.1
1,129,440	-				+1.5
1,129,440	-				-1.2
1,129,447	+				+0.0
1,129,447	+				-1.2
1,129,455	-				-0.4
1,129,457	-				+1.0
1,129,470	+				+2.5
1,129,521	+				+1.5
1,129,530	-				+0.1
1,129,561	+		Synpcc7942_1112	0.12	+1.3
1,129,561	+		Synpcc7942_1112	0.12	+0.3
1,129,565	+		Synpcc7942_1112	0.13	+1.2
1,129,569	+		Synpcc7942_1112	0.13	+0.1
1,129,592	-		Synpcc7942_1112	0.16	+0.6
1,129,603	+		Synpcc7942_1112	0.17	+0.4
1,129,637	-		Synpcc7942_1112	0.20	+0.0
1,129,655	-		Synpcc7942_1112	0.22	+1.7
1,129,671	-		Synpcc7942_1112	0.24	+0.9
1,129,696	+				+1.6
1,129,711	-		Synpcc7942_1112	0.28	-1.1
1,129,717	+		Synpcc7942_1112	0.29	+1.0
1,129,803	+		Synpcc7942_1112	0.38	+2.6
1,129,861	-		Synpcc7942_1112	0.44	+1.2
1,129,863	+		Synpcc7942_1112	0.44	+1.5
1,129,943	+		Synpcc7942_1112	0.53	+0.2
1,129,951	-		Synpcc7942_1112	0.54	+2.0
1,129,955	+		Synpcc7942_1112	0.54	+0.9
1,129,955	+				+2.4
1,129,955	+		Synpcc7942_1112	0.54	+1.3
1,129,958	-		Synpcc7942_1112	0.55	+1.7
1,129,958	-		Synpcc7942_1112	0.55	+1.2
1,129,958	-		Synpcc7942_1112	0.55	-0.8
1,129,966	+		Synpcc7942_1112	0.55	+0.9
1,129,971	-		Synpcc7942_1112	0.56	+1.5
1,129,977	+		Synpcc7942_1112	0.57	+1.8
1,129,977	+		Synpcc7942_1112	0.57	+0.8
1,130,029	+		Synpcc7942_1112	0.62	+1.1
1,130,032	+		Synpcc7942_1112	0.62	+1.3
1,130,040	-		Synpcc7942_1112	0.63	+2.0
1,130,040	-		Synpcc7942_1112	0.63	+2.0
1,130,042	+				+2.6
1,130,042	+		Synpcc7942_1112	0.63	+1.0
1,130,042	+		Synpcc7942_1112	0.63	+0.8
1,130,048	-		Synpcc7942_1112	0.64	+1.9
1,130,048	-		Synpcc7942_1112	0.64	+1.0
1,130,057	+		Synpcc7942_1112	0.65	+1.5
1,130,068	-				+2.0
1,130,092	+				+1.6
1,130,100	-		Synpcc7942_1112	0.70	+1.2
1,130,111	+		Synpcc7942_1112	0.71	+1.4
1,130,113	+		Synpcc7942_1112	0.71	+0.0
1,130,119	-		Synpcc7942_1112	0.72	+2.2
1,130,121	-		Synpcc7942_1112	0.72	+1.2
1,130,127	-				+2.4
1,130,129	+		Synpcc7942_1112	0.73	+3.0
1,130,136	+		Synpcc7942_1112	0.73	+0.3
1,130,154	+				+2.6
1,130,154	+		Synpcc7942_1112	0.75	+1.5
1,130,154	+		Synpcc7942_1112	0.75	+1.7
1,130,156	+		Synpcc7942_1112	0.76	+1.0
1,130,162	-		Synpcc7942_1112	0.76	+3.1
1,130,162	-		Synpcc7942_1112	0.76	+1.1
1,130,162	-		Synpcc7942_1112	0.76	+1.7
1,130,188	+		Synpcc7942_1112	0.79	-0.1
1,130,218	-		Synpcc7942_1112	0.82	+1.3
1,130,249	+		Synpcc7942_1112	0.85	+1.8
1,130,252	-		Synpcc7942_1112	0.86	+1.1
1,130,257	-		Synpcc7942_1112	0.86	-2.2
1,130,260	+		Synpcc7942_1112	0.87	+1.5
1,130,268	-		Synpcc7942_1112	0.87	+1.4
1,130,270	+		Synpcc7942_1112	0.88	+1.4
1,130,288	-		Synpcc7942_1112	0.90	-1.0
1,130,314	+				+0.5
1,130,340	+				+0.1
1,130,345	+				-0.6
1,130,374	-				-0.2
1,130,375	+				-1.7
1,130,408	+				+0.0
1,130,408	+				+0.8
1,130,416	-				+0.2
1,130,427	-				+0.8
1,130,430	+				-2.1
1,130,438	-				+1.0
1,130,445	-				-1.4
1,130,451	+				+0.1
1,130,459	-				-0.9
1,130,459	-				+1.8
1,130,459	-				-1.1
1,130,459	-				+0.5
1,130,481	-				-1.0
1,130,505	+		Synpcc7942_1113	0.11	+1.2
1,130,513	-		Synpcc7942_1113	0.12	-2.3
1,130,513	-		Synpcc7942_1113	0.12	+2.7
1,130,519	-		Synpcc7942_1113	0.13	-0.5
1,130,519	-		Synpcc7942_1113	0.13	-0.3
1,130,521	+		Synpcc7942_1113	0.13	+1.3
1,130,523	+		Synpcc7942_1113	0.13	+0.2
1,130,523	+		Synpcc7942_1113	0.13	-1.7
1,130,529	-		Synpcc7942_1113	0.13	-1.5
1,130,529	-		Synpcc7942_1113	0.13	+1.1
1,130,529	-		Synpcc7942_1113	0.13	+0.1
1,130,560	-		Synpcc7942_1113	0.16	-1.3
1,130,569	-		Synpcc7942_1113	0.17	-1.6
1,130,656	+		Synpcc7942_1113	0.25	-0.5
1,130,666	+		Synpcc7942_1113	0.26	-0.6
1,130,666	+		Synpcc7942_1113	0.26	-1.4
1,130,666	+		Synpcc7942_1113	0.26	-0.7
1,130,669	-		Synpcc7942_1113	0.26	+0.3
1,130,674	+		Synpcc7942_1113	0.27	+0.7
1,130,674	-		Synpcc7942_1113	0.27	-1.5
1,130,674	-		Synpcc7942_1113	0.27	+0.2
1,130,716	-		Synpcc7942_1113	0.31	+0.3
1,130,716	-		Synpcc7942_1113	0.31	+0.5
1,130,774	+		Synpcc7942_1113	0.36	-2.1
1,130,774	+		Synpcc7942_1113	0.36	-1.5
1,130,774	+		Synpcc7942_1113	0.36	-0.5
1,130,782	-		Synpcc7942_1113	0.37	-0.8
1,130,782	-		Synpcc7942_1113	0.37	-0.4
1,130,782	-		Synpcc7942_1113	0.37	-2.3
1,130,782	-		Synpcc7942_1113	0.37	+0.6
1,130,782	-		Synpcc7942_1113	0.37	+0.6
1,130,797	-		Synpcc7942_1113	0.38	-0.1
1,130,806	+		Synpcc7942_1113	0.39	-1.9
1,130,823	+		Synpcc7942_1113	0.40	-1.5
1,130,851	+		Synpcc7942_1113	0.43	+0.1
1,130,851	+		Synpcc7942_1113	0.43	-0.3
1,130,851	+		Synpcc7942_1113	0.43	+1.1
1,130,851	+		Synpcc7942_1113	0.43	+0.3
1,130,851	+		Synpcc7942_1113	0.43	-1.1
1,130,851	+		Synpcc7942_1113	0.43	-0.5
1,130,859	-		Synpcc7942_1113	0.44	-1.6
1,130,869	+		Synpcc7942_1113	0.45	-1.2
1,130,869	+		Synpcc7942_1113	0.45	-1.1
1,130,869	-		Synpcc7942_1113	0.45	+1.6
1,130,874	+		Synpcc7942_1113	0.45	-2.3
1,130,874	+		Synpcc7942_1113	0.45	-0.9
1,130,879	-		Synpcc7942_1113	0.46	+1.2
1,130,903	+		Synpcc7942_1113	0.48	-0.1
1,130,904	-		Synpcc7942_1113	0.48	-1.8
1,130,913	+		Synpcc7942_1113	0.49	+1.2
1,130,918	+		Synpcc7942_1113	0.49	+0.5
1,130,918	+		Synpcc7942_1113	0.49	-0.2
1,130,939	-		Synpcc7942_1113	0.51	-0.8
1,130,964	+		Synpcc7942_1113	0.53	-1.2
1,130,964	+		Synpcc7942_1113	0.53	+0.5
1,130,969	+		Synpcc7942_1113	0.54	-0.4
1,130,969	+		Synpcc7942_1113	0.54	-0.3
1,130,969	+		Synpcc7942_1113	0.54	-2.3
1,130,970	+		Synpcc7942_1113	0.54	-0.0
1,130,970	-		Synpcc7942_1113	0.54	+1.1
1,130,976	+		Synpcc7942_1113	0.54	-0.4
1,130,976	+		Synpcc7942_1113	0.54	-1.0
1,130,976	+		Synpcc7942_1113	0.54	+0.0
1,130,977	-		Synpcc7942_1113	0.54	-0.8
1,130,977	-		Synpcc7942_1113	0.54	-0.4
1,130,977	-		Synpcc7942_1113	0.54	-1.4
1,130,977	-		Synpcc7942_1113	0.54	-0.3
1,130,977	-		Synpcc7942_1113	0.54	-1.9
1,130,984	-		Synpcc7942_1113	0.55	+0.5
1,130,986	+		Synpcc7942_1113	0.55	-0.7
1,130,998	+		Synpcc7942_1113	0.56	-1.3
1,131,022	+		Synpcc7942_1113	0.59	-1.0
1,131,030	-		Synpcc7942_1113	0.59	-1.9
1,131,030	-		Synpcc7942_1113	0.59	+0.1
1,131,055	-		Synpcc7942_1113	0.62	-2.0
1,131,077	+		Synpcc7942_1113	0.64	-1.1
1,131,077	+		Synpcc7942_1113	0.64	+1.1
1,131,077	+		Synpcc7942_1113	0.64	-0.8
1,131,082	+		Synpcc7942_1113	0.64	-0.7
1,131,092	+		Synpcc7942_1113	0.65	-0.6
1,131,100	-		Synpcc7942_1113	0.66	-1.4
1,131,158	-		Synpcc7942_1113	0.71	-1.9
1,131,160	-		Synpcc7942_1113	0.71	+1.3
1,131,170	+		Synpcc7942_1113	0.72	-0.1
1,131,177	-		Synpcc7942_1113	0.73	-0.5
1,131,177	-		Synpcc7942_1113	0.73	-0.5
1,131,183	+		Synpcc7942_1113	0.73	+1.5
1,131,191	-		Synpcc7942_1113	0.74	+1.0
1,131,212	+		Synpcc7942_1113	0.76	-0.5
1,131,216	-		Synpcc7942_1113	0.76	-1.2
1,131,249	+		Synpcc7942_1113	0.79	-0.9
1,131,278	+		Synpcc7942_1113	0.82	-1.8
1,131,278	+		Synpcc7942_1113	0.82	-0.4
1,131,313	-		Synpcc7942_1113	0.85	+0.5
1,131,355	+		Synpcc7942_1113	0.89	+1.7
1,131,363	-		Synpcc7942_1113	0.90	+0.5
1,131,376	-				+1.1
1,131,376	-				+1.5
1,131,399	-				+0.1
1,131,401	+				+1.1
1,131,413	+				-0.7
1,131,439	+				-1.1
1,131,439	+				+1.8
1,131,471	+				-1.5
1,131,479	-				-1.2
1,131,485	-				-2.4
1,132,344	-				-0.2
1,132,359	+				-0.9
1,132,359	+				-1.1
1,132,359	+				-0.7
1,132,359	+				+0.1
1,132,367	-				-1.1
1,132,389	-		Synpcc7942_1115	0.13	-2.5
1,132,450	+		Synpcc7942_1115	0.29	-1.4
1,132,458	-		Synpcc7942_1115	0.31	-1.8
1,132,465	+		Synpcc7942_1115	0.33	-0.3
1,132,470	-		Synpcc7942_1115	0.34	-0.5