Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5381

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
113,360	+				-0.0
113,360	+				-0.0
113,361	-				-0.0
113,372	+				-0.0
113,407	+				-0.0
113,428	-				-1.6
113,629	+		Pf1N1B4_5380	0.33	-0.0
113,629	+		Pf1N1B4_5380	0.33	-1.8
113,629	+		Pf1N1B4_5380	0.33	-2.0
113,629	+				-0.0
113,630	-		Pf1N1B4_5380	0.33	-1.5
113,632	+		Pf1N1B4_5380	0.34	-1.6
113,632	+		Pf1N1B4_5380	0.34	-0.0
113,633	-		Pf1N1B4_5380	0.34	-1.8
113,633	-		Pf1N1B4_5380	0.34	-0.0
113,659	+		Pf1N1B4_5380	0.40	-1.9
113,659	+		Pf1N1B4_5380	0.40	-0.0
113,659	+		Pf1N1B4_5380	0.40	-2.7
113,659	+		Pf1N1B4_5380	0.40	-0.0
113,660	-				-1.5
113,682	+		Pf1N1B4_5380	0.45	-1.6
113,721	+		Pf1N1B4_5380	0.54	-1.6
113,758	+		Pf1N1B4_5380	0.63	-0.0
113,944	+				-0.0
113,944	+				-0.0
113,944	+				-0.0
113,944	+				-3.5
114,012	+				-1.1
114,012	+				-0.0
114,012	+				-0.0
114,012	+				-0.0
114,012	+				-0.0
114,012	+				-0.0
114,012	+				-0.0
114,013	-				-2.0
114,013	-				-0.0
114,013	-				-0.6
114,035	+				-0.0
114,101	+				-0.0
114,109	-				-0.7
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-1.3
114,143	+				-1.9
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-2.2
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,143	+				-0.0
114,144	-				-0.0
114,144	-				-0.0
114,144	-				-2.1
114,147	+				-0.0
114,147	+				-0.0
114,147	+				-0.0
114,147	+				-0.6
114,147	+				-0.0
114,147	+				-2.6
114,147	+				-0.0
114,147	+				-0.0
114,147	+				-0.0
114,147	+				-0.0
114,147	+				-0.0
114,148	-				-0.0
114,148	-				-1.3
114,148	-				-0.0
114,148	-				-0.0
114,163	+				-0.0
114,163	+				-0.0
114,163	+				-0.0
114,164	-				-0.8
114,181	+				-0.0
114,181	+				-0.0
114,281	+		Pf1N1B4_5381	0.35	-2.7
114,286	+		Pf1N1B4_5381	0.37	-0.0
114,286	+		Pf1N1B4_5381	0.37	-4.5
114,320	+		Pf1N1B4_5381	0.49	-0.0
114,321	-		Pf1N1B4_5381	0.49	-0.0
114,343	+				-4.3
114,343	+		Pf1N1B4_5381	0.57	-0.0
114,343	+		Pf1N1B4_5381	0.57	-0.0
114,343	+		Pf1N1B4_5381	0.57	-1.9
114,343	+		Pf1N1B4_5381	0.57	-0.0
114,343	+		Pf1N1B4_5381	0.57	-0.0
114,343	+		Pf1N1B4_5381	0.57	-0.0
114,343	+		Pf1N1B4_5381	0.57	-0.0
114,343	+		Pf1N1B4_5381	0.57	+0.6
114,400	+		Pf1N1B4_5381	0.77	-0.0
114,400	+		Pf1N1B4_5381	0.77	-3.1
114,400	+		Pf1N1B4_5381	0.77	-1.4
114,400	+		Pf1N1B4_5381	0.77	-0.0
114,400	+		Pf1N1B4_5381	0.77	-0.0
114,400	+		Pf1N1B4_5381	0.77	-0.0
114,400	+		Pf1N1B4_5381	0.77	-0.0
114,400	+		Pf1N1B4_5381	0.77	-0.0
114,401	-				-1.6
114,404	+		Pf1N1B4_5381	0.78	-0.0
114,404	+		Pf1N1B4_5381	0.78	-0.0
114,404	+		Pf1N1B4_5381	0.78	-0.0
114,404	+		Pf1N1B4_5381	0.78	-0.0
114,404	+		Pf1N1B4_5381	0.78	-0.0
114,404	+		Pf1N1B4_5381	0.78	-2.2
114,404	+		Pf1N1B4_5381	0.78	-0.0
114,405	-		Pf1N1B4_5381	0.79	-0.0
114,405	-		Pf1N1B4_5381	0.79	-0.0
114,434	+		Pf1N1B4_5381	0.89	-1.8
114,434	+		Pf1N1B4_5381	0.89	-1.2
114,532	+				-0.0
114,620	+				-0.0
114,620	+				-0.0
114,637	-				-2.8
114,684	+				-0.7
114,797	+				-0.0
114,797	+				-0.7
114,994	+				-0.0
114,995	-				-0.0
114,995	-				-2.7
115,027	+		Pf1N1B4_5382	0.17	-0.2
115,028	-		Pf1N1B4_5382	0.17	-0.0
115,210	+		Pf1N1B4_5382	0.58	-0.0
115,211	-		Pf1N1B4_5382	0.59	-0.0
115,211	-		Pf1N1B4_5382	0.59	-0.0
115,298	+		Pf1N1B4_5382	0.78	-0.0
115,299	-		Pf1N1B4_5382	0.78	-0.0
115,299	-		Pf1N1B4_5382	0.78	-0.0
115,406	+				-1.6
115,406	+				-0.0
115,415	+				-0.0
115,415	+				-0.0
115,415	+				-0.9
115,416	-				-0.0
115,434	+				-0.0
115,434	+				-2.6
115,434	+				-0.0
115,434	+				-0.0
115,434	+				-0.0
115,434	+				-0.0
115,434	+				-3.7
115,434	+				-0.0
115,434	+				-0.0
115,435	-				-0.0