Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5378

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
110,154	-		Pf1N1B4_5377	0.28	-1.8
110,170	+		Pf1N1B4_5377	0.31	-1.4
110,263	-		Pf1N1B4_5377	0.50	-0.0
110,289	-		Pf1N1B4_5377	0.55	-0.0
110,390	+		Pf1N1B4_5377	0.75	-0.0
110,391	-		Pf1N1B4_5377	0.76	-0.0
110,494	-				-0.0
110,494	-				-1.6
110,494	-				-0.0
110,580	+				-0.0
110,581	-				-0.0
110,605	+				-1.9
110,605	+				-2.0
110,605	+				-0.0
110,605	+				-1.2
110,605	+				-0.0
110,605	+				-1.7
110,606	-				-0.0
110,606	-				-2.0
110,606	-				-0.0
110,606	-				-1.6
110,606	-				-0.0
110,606	-				-0.0
110,606	-				-0.0
110,606	-				-1.8
110,606	-				-0.0
110,609	+				-0.0
110,609	+				-2.1
110,609	+				-0.0
110,609	+				-0.0
110,610	-				-0.0
110,610	-				-2.4
110,653	+				-1.6
110,653	+				-0.0
110,653	+				-0.0
110,654	-				-0.0
110,654	-				-1.6
110,689	+				-0.0
110,690	-				-0.0
110,697	+				-1.8
110,697	+				-1.0
110,697	+				-2.1
110,698	-				-1.4
110,698	-				-0.0
110,698	-				-0.0
110,698	-				-0.0
111,110	+				-0.0
111,110	+				-1.5
111,111	-				-0.0
111,111	-				-0.0
111,111	-				-1.6
111,111	-				-0.0
111,111	-				-0.0
111,536	-				-0.0
111,536	-				-2.2
111,625	-		Pf1N1B4_5378	0.45	-0.0
112,088	+		Pf1N1B4_5378	0.84	-0.0
112,088	+		Pf1N1B4_5378	0.84	+1.0
112,088	+		Pf1N1B4_5378	0.84	-0.0
112,088	+		Pf1N1B4_5378	0.84	-0.0
112,088	+		Pf1N1B4_5378	0.84	-0.0
112,088	+				-1.7
112,089	-		Pf1N1B4_5378	0.84	-0.0
112,089	-		Pf1N1B4_5378	0.84	-3.8
112,089	-		Pf1N1B4_5378	0.84	-0.0
112,089	-		Pf1N1B4_5378	0.84	-0.0
112,089	-		Pf1N1B4_5378	0.84	-0.0
112,332	+				-0.0
112,332	+				-0.0
112,333	-				-0.0
112,333	-				-0.0
112,333	-				-2.4
112,347	+				-1.8
112,347	+				-0.0
112,347	+				-0.0
112,347	+				-1.5
112,348	-				-1.1
112,348	-				-0.0
112,348	-				-0.0
112,348	-				-0.0
112,348	-				-2.5
112,348	-				-0.0
112,348	-				-1.8
112,348	-				-0.0
112,386	-				-0.0
112,427	+				-2.8
112,427	+				-0.0
112,431	+				-0.0
112,431	+				-0.0
112,431	+				-0.0
112,431	+				-1.4
112,431	+				-1.7
112,431	+				-0.0
112,431	+				-1.6
112,432	-				-3.4
112,432	-				-0.0
112,432	-				-0.0
112,432	-				-0.0
112,432	-				-0.0
112,432	-				-1.7
112,570	+				-0.0
112,570	+				-0.0
112,570	+				-2.6
112,571	-				-0.0
112,571	-				-0.0
112,636	+				-1.0
112,636	+				-0.0
112,649	+				-0.0
112,649	+				-0.0
112,650	-				-0.0
112,650	-				-0.0
112,650	-				-0.0
112,686	+				-0.0
112,686	+				-0.0
112,686	+				-0.7
112,687	-				-2.5
112,687	-				-0.0
112,843	+				-0.0
112,870	+				-0.0
112,871	-				-0.0
112,871	-				+1.0
112,903	+				-0.0
112,903	+				-1.3
112,903	+				-0.0
112,904	-				-0.0
112,904	-				-0.0
112,904	-				-2.3
112,904	-				-2.4
112,904	-				-0.0
112,912	+				-0.0
112,913	-				-0.0
112,913	-				-0.0
113,038	+				-0.0
113,038	+				-0.0
113,038	+				-0.0
113,038	+				-1.4
113,039	-				-0.0
113,133	+		Pf1N1B4_5379	0.29	-0.0
113,156	+		Pf1N1B4_5379	0.36	-0.0