Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5340

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
83,011	+		Pf1N1B4_5338	0.54	-0.0
83,011	+		Pf1N1B4_5338	0.54	-2.0
83,012	-		Pf1N1B4_5338	0.54	-0.0
83,012	-		Pf1N1B4_5338	0.54	-0.0
83,186	+				-0.0
83,397	+				-1.1
83,398	-				-0.0
83,513	+				-1.3
83,513	+				-1.0
83,514	-				-0.0
83,514	-				-1.1
83,514	-				-0.0
83,534	+				-2.0
83,645	+				-0.0
83,645	+				-3.1
83,646	-				-2.5
83,646	-				-0.0
83,646	-				-1.2
83,646	-				-1.2
83,646	-				-1.7
83,677	+				-0.0
83,677	+				-0.0
83,677	+				-0.0
83,677	+				-0.0
83,677	+				-0.0
83,678	-				-0.0
83,678	-				-1.8
83,678	-				-0.6
83,678	-				-0.0
83,708	+				-0.0
83,708	+				-0.0
83,783	-				-0.0
83,835	+				-0.0
83,836	-				-0.5
83,879	+				-0.0
84,023	+		Pf1N1B4_5340	0.20	-0.0
84,023	+		Pf1N1B4_5340	0.20	-0.0
84,187	+		Pf1N1B4_5340	0.66	-3.1
84,187	+		Pf1N1B4_5340	0.66	-3.4
84,187	+		Pf1N1B4_5340	0.66	-1.6
84,188	-		Pf1N1B4_5340	0.66	-0.0
84,188	-		Pf1N1B4_5340	0.66	-0.0
84,188	-		Pf1N1B4_5340	0.66	-0.0
84,580	+				-0.0
84,580	+				-0.0
84,580	+				-0.0
84,581	-				-0.0
84,643	-				-0.0
84,696	+		Pf1N1B4_5341	0.17	-1.2
84,907	+				-1.4
84,907	+				-2.6
84,907	+				-1.5
84,908	-				-1.6
85,007	+		Pf1N1B4_5342	0.39	-2.2
85,007	+		Pf1N1B4_5342	0.39	-0.0
85,125	-				-0.0
85,128	+				-0.0
85,129	+				-2.5
85,129	+				-0.0
85,129	+				-1.5
85,130	-				-0.0