Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5265

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
22,527	+				-0.0
22,528	-				-0.7
22,541	+				-0.0
22,541	+				-0.0
22,542	-				-0.0
22,542	-				-0.0
22,542	-				-0.0
22,542	-				-0.0
22,604	+		Pf1N1B4_5263	0.39	-1.8
22,604	+		Pf1N1B4_5263	0.39	-2.0
22,605	-		Pf1N1B4_5263	0.40	-2.4
22,605	-		Pf1N1B4_5263	0.40	-2.1
22,605	-		Pf1N1B4_5263	0.40	-0.0
22,605	-		Pf1N1B4_5263	0.40	-2.3
22,605	-		Pf1N1B4_5263	0.40	-1.3
22,605	-		Pf1N1B4_5263	0.40	-2.4
22,605	-		Pf1N1B4_5263	0.40	-0.0
22,605	-		Pf1N1B4_5263	0.40	-0.0
22,605	-		Pf1N1B4_5263	0.40	-0.0
22,605	-		Pf1N1B4_5263	0.40	-0.0
22,670	+		Pf1N1B4_5263	0.73	-1.0
22,671	-		Pf1N1B4_5263	0.73	-0.0
22,671	-				-1.8
22,671	-				-0.0
22,671	-		Pf1N1B4_5263	0.73	-2.2
22,718	-				-1.4
22,718	-				-1.7
22,797	+		Pf1N1B4_5264	0.47	-0.0
22,798	-				-0.0
22,878	+				-1.3
22,879	-				-0.0
22,879	-				-0.0
22,905	-				-1.9
22,906	+				-0.7
22,907	-				-0.0
22,907	-				-2.2
22,938	-				-0.0
22,958	-				-0.0
22,974	-				-2.9
23,042	-				-1.2
23,042	-				-0.0
23,042	-				-2.9
23,042	-				-2.9
23,042	-				-0.0
23,077	-				-0.0
23,077	-				-0.0
23,211	-		Pf1N1B4_5265	0.33	-0.0
23,211	-		Pf1N1B4_5265	0.33	-0.0
23,211	-		Pf1N1B4_5265	0.33	-0.0
23,251	+		Pf1N1B4_5265	0.64	-0.0
23,252	-		Pf1N1B4_5265	0.65	-0.0
23,252	-		Pf1N1B4_5265	0.65	-2.6
23,252	-		Pf1N1B4_5265	0.65	-0.0
23,252	-		Pf1N1B4_5265	0.65	-3.6
23,252	-		Pf1N1B4_5265	0.65	-0.0
23,312	+				-0.8
23,312	+				-0.0
23,313	-				-2.0
23,313	-				-0.0
23,398	+		Pf1N1B4_5266	0.25	-0.0
23,399	-		Pf1N1B4_5266	0.25	-0.0
23,533	-		Pf1N1B4_5266	0.67	-0.0
23,533	-		Pf1N1B4_5266	0.67	-0.0
23,686	+				-0.0
23,687	-				-2.2
23,693	-				-2.1
23,810	+				-3.0
23,840	+				-0.0
23,840	+				-0.0
23,841	-				-0.0
23,841	-				-0.0
23,841	-				-2.0
23,932	+				-0.0
23,942	+				-0.6
23,942	+				-0.4
23,942	+				-1.9
24,094	+				-2.8
24,094	+				-0.0
24,094	+				-1.6
24,156	+				-0.0
24,292	+				-0.0
24,292	+				-0.0
24,293	-				-0.0
24,293	-				-0.0
24,293	-				-3.1