Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5061

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
5,606,180	+		Pf1N1B4_5060	0.58	-0.0
5,606,338	+				-0.0
5,606,425	+		Pf1N1B4_5060	0.69	-0.0
5,606,528	+		Pf1N1B4_5060	0.74	-1.6
5,606,611	+				-0.0
5,606,753	+		Pf1N1B4_5060	0.84	-2.9
5,606,753	+		Pf1N1B4_5060	0.84	-1.1
5,606,754	-		Pf1N1B4_5060	0.84	-0.0
5,606,909	+				-0.0
5,606,937	-				-2.7
5,607,026	+				-0.0
5,607,026	+				-0.0
5,607,026	+				-1.9
5,607,027	-				-0.0
5,607,027	-				-0.0
5,607,027	-				-0.0
5,607,134	+		Pf1N1B4_5061	0.13	-0.0
5,607,135	-		Pf1N1B4_5061	0.13	-0.0
5,607,147	+		Pf1N1B4_5061	0.17	-2.3
5,607,179	+		Pf1N1B4_5061	0.28	-0.0
5,607,179	+		Pf1N1B4_5061	0.28	-0.0
5,607,179	+		Pf1N1B4_5061	0.28	-4.2
5,607,180	-		Pf1N1B4_5061	0.28	-0.0
5,607,180	-		Pf1N1B4_5061	0.28	-3.1
5,607,876	-		Pf1N1B4_5062	0.15	-0.0
5,608,024	+				-2.7
5,608,025	-		Pf1N1B4_5062	0.25	-1.6
5,608,062	-		Pf1N1B4_5062	0.28	-1.4
5,608,062	-		Pf1N1B4_5062	0.28	-0.0
5,608,062	-		Pf1N1B4_5062	0.28	-0.3