Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4866

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
5,383,554	-		Pf1N1B4_4865	0.47	-0.1
5,383,557	+		Pf1N1B4_4865	0.47	-2.2
5,383,558	-		Pf1N1B4_4865	0.47	-3.1
5,383,558	-		Pf1N1B4_4865	0.47	-1.5
5,383,689	+		Pf1N1B4_4865	0.58	-1.9
5,384,239	-				-1.6
5,384,272	+				-2.0
5,384,272	+				-0.1
5,384,273	-				-1.7
5,384,273	-				-1.8
5,384,318	+				-0.8
5,384,320	+				-0.1
5,384,397	+				-2.9
5,384,529	+				-0.1
5,384,530	-				-1.9
5,384,530	-				-0.1
5,384,561	+		Pf1N1B4_4866	0.26	-3.8
5,384,561	+		Pf1N1B4_4866	0.26	-1.7
5,384,599	+		Pf1N1B4_4866	0.56	-2.6
5,384,615	-		Pf1N1B4_4866	0.69	-0.1
5,384,633	+		Pf1N1B4_4866	0.83	-0.1
5,384,633	+		Pf1N1B4_4866	0.83	-0.1
5,385,195	+		Pf1N1B4_4867	0.49	-0.1
5,385,257	+		Pf1N1B4_4867	0.55	-0.1
5,385,257	+		Pf1N1B4_4867	0.55	-0.1
5,385,257	+				-0.1
5,385,257	+		Pf1N1B4_4867	0.55	-0.1
5,385,258	-		Pf1N1B4_4867	0.55	-3.1
5,385,258	-		Pf1N1B4_4867	0.55	-0.1
5,385,381	+		Pf1N1B4_4867	0.67	-1.1
5,385,381	+		Pf1N1B4_4867	0.67	-3.1
5,385,382	-		Pf1N1B4_4867	0.67	-0.1
5,385,485	-		Pf1N1B4_4867	0.78	-0.1
5,385,498	+		Pf1N1B4_4867	0.79	-0.1