Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4812

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
5,314,129	-				-3.9
5,314,356	-				-0.0
5,314,379	+				-0.0
5,314,379	+				-1.5
5,314,380	-				-0.0
5,314,380	-				-0.0
5,314,663	-				-0.0
5,314,691	-				-0.0
5,314,693	-				-1.6
5,314,700	-				-2.0
5,314,765	-				-0.0
5,314,812	-				-0.0
5,314,812	-				-0.0
5,314,853	+		Pf1N1B4_4812	0.14	-1.3
5,314,858	-		Pf1N1B4_4812	0.14	-2.0
5,314,858	-		Pf1N1B4_4812	0.14	-3.2
5,314,976	+		Pf1N1B4_4812	0.26	-0.0
5,315,001	-		Pf1N1B4_4812	0.29	-2.7
5,315,391	+		Pf1N1B4_4812	0.69	-2.7
5,315,483	+		Pf1N1B4_4812	0.78	-0.0
5,315,486	+		Pf1N1B4_4812	0.79	-0.0
5,315,486	+		Pf1N1B4_4812	0.79	-0.0
5,315,486	+				-0.0
5,315,487	-				-0.1
5,315,636	+				-3.7
5,315,636	+				-1.2
5,315,637	-				-2.7
5,315,637	-				-5.0
5,315,637	-				-1.6
5,315,773	-				-0.8
5,315,784	-		Pf1N1B4_4813	0.11	-2.6
5,316,237	+		Pf1N1B4_4813	0.71	-1.9
5,316,536	-				-0.0