Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4561

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
5,031,084	-				-0.1
5,031,186	-				-0.1
5,031,209	-				-2.1
5,031,302	-				-0.1
5,031,351	+				-0.1
5,031,477	+		Pf1N1B4_4560	0.36	-2.7
5,031,477	+		Pf1N1B4_4560	0.36	-1.8
5,031,477	+		Pf1N1B4_4560	0.36	-0.1
5,031,611	+		Pf1N1B4_4560	0.71	-2.1
5,031,611	+		Pf1N1B4_4560	0.71	-2.0
5,031,719	+				-1.0
5,031,720	-				-1.6
5,031,791	+				-0.1
5,031,843	-				-0.1
5,032,074	+		Pf1N1B4_4561	0.29	-0.1
5,032,075	-		Pf1N1B4_4561	0.29	-0.1
5,032,075	-		Pf1N1B4_4561	0.29	-0.1
5,032,077	+		Pf1N1B4_4561	0.29	-0.1
5,032,335	-		Pf1N1B4_4561	0.74	-2.1
5,032,410	+		Pf1N1B4_4561	0.87	-2.2
5,032,410	+		Pf1N1B4_4561	0.87	-3.6
5,032,410	+		Pf1N1B4_4561	0.87	-0.1
5,032,410	+		Pf1N1B4_4561	0.87	-1.8
5,032,410	+		Pf1N1B4_4561	0.87	-0.1
5,032,411	-				-1.7
5,032,411	-		Pf1N1B4_4561	0.87	-2.8
5,032,411	-		Pf1N1B4_4561	0.87	-0.1
5,032,414	+		Pf1N1B4_4561	0.88	-0.1
5,032,415	-		Pf1N1B4_4561	0.88	-0.1
5,032,439	-				-0.1
5,032,583	-				-0.1
5,032,635	-				-0.1
5,032,795	+				-2.0
5,032,796	-				-0.1
5,033,001	-		Pf1N1B4_4562	0.19	-1.1
5,033,087	-				-1.1
5,033,119	+				-1.1
5,033,208	-		Pf1N1B4_4562	0.35	-0.1