Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4489

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
4,951,713	+		Pf1N1B4_4488	0.68	-1.5
4,951,842	+		Pf1N1B4_4488	0.73	-1.4
4,952,304	+				-2.0
4,952,433	+				-0.0
4,952,538	-				-0.0
4,952,907	+		Pf1N1B4_4489	0.35	-0.0
4,952,966	+		Pf1N1B4_4489	0.44	-2.5
4,953,051	-		Pf1N1B4_4489	0.57	-2.3
4,953,376	+				-1.1
4,953,486	+		Pf1N1B4_4490	0.16	-2.0
4,953,487	-		Pf1N1B4_4490	0.16	-0.0
4,953,487	-		Pf1N1B4_4490	0.16	-1.4
4,953,493	+		Pf1N1B4_4490	0.17	-3.2
4,953,970	+				-1.8
4,953,970	+				-0.0
4,953,971	-				-3.0
4,953,971	-				-1.3
4,953,971	-				-2.5
4,953,971	-				-0.0
4,953,975	-				-0.0
4,954,028	+				-1.9
4,954,036	+				-0.0
4,954,039	+				-0.0
4,954,039	+				-0.0
4,954,040	-				-0.0
4,954,044	+				-0.0
4,954,099	+				-2.1
4,954,099	+				-0.0
4,954,224	-				-0.0