Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4301

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
4,764,404	-		Pf1N1B4_4300	0.59	-1.7
4,764,784	+				-0.0
4,764,785	-				-0.0
4,764,785	-				-0.0
4,764,794	+				-0.0
4,764,794	+				-0.0
4,764,814	-				-1.4
4,764,861	-				-0.0
4,764,861	-				-0.0
4,765,034	+				-2.5
4,765,174	+				-0.0
4,765,175	-				-1.7
4,765,175	-				-0.0
4,765,175	-				-2.3
4,765,294	+		Pf1N1B4_4301	0.36	-1.7
4,765,294	+		Pf1N1B4_4301	0.36	-0.0
4,765,295	-		Pf1N1B4_4301	0.37	-0.0
4,765,295	-		Pf1N1B4_4301	0.37	-0.0
4,765,301	-		Pf1N1B4_4301	0.39	-0.0
4,765,387	+		Pf1N1B4_4301	0.72	-0.0
4,765,388	-		Pf1N1B4_4301	0.72	-0.0
4,765,423	+		Pf1N1B4_4301	0.85	-2.4
4,765,423	+		Pf1N1B4_4301	0.85	-3.2
4,765,424	-		Pf1N1B4_4301	0.86	-0.0
4,765,721	+				-0.0
4,765,721	+				-1.7
4,765,884	-				-0.0
4,765,884	-				-0.0
4,765,884	-				-0.0
4,766,374	-		Pf1N1B4_4303	0.39	-1.5