Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4043

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
4,494,705	-		Pf1N1B4_4042	0.65	+0.0
4,494,705	-		Pf1N1B4_4042	0.65	-2.7
4,494,859	+		Pf1N1B4_4042	0.77	+0.0
4,494,860	-		Pf1N1B4_4042	0.77	-1.4
4,494,860	-		Pf1N1B4_4042	0.77	+0.0
4,494,878	+		Pf1N1B4_4042	0.78	+0.0
4,494,878	+		Pf1N1B4_4042	0.78	+0.0
4,494,879	-		Pf1N1B4_4042	0.78	+0.0
4,495,083	-				+0.0
4,495,187	+				+0.0
4,495,188	-				+0.0
4,495,188	-				-1.7
4,495,267	+				-2.1
4,495,267	+				+0.0
4,495,267	+				+0.0
4,495,268	-				+0.0
4,495,268	-				-2.1
4,495,268	-				-1.3
4,495,268	-				+0.0
4,495,337	+				+0.0
4,495,409	+				+0.0
4,495,409	+				-3.2
4,495,410	-				+0.0
4,495,414	-				+0.0
4,495,623	-				-1.4
4,495,635	+				-0.5
4,495,636	-				+0.0
4,495,638	+				+0.0
4,495,638	+				-4.0
4,495,638	+				-1.9
4,495,668	-				+0.0
4,495,678	-				-1.3
4,495,724	+				+0.0
4,495,724	+				-0.8
4,495,724	+				+0.0
4,495,725	-				-1.5
4,495,837	+		Pf1N1B4_4043	0.22	+0.0
4,495,837	+				+0.0
4,495,838	-		Pf1N1B4_4043	0.23	-2.3
4,495,875	+		Pf1N1B4_4043	0.27	-5.4
4,495,922	+		Pf1N1B4_4043	0.34	-1.3
4,495,974	-		Pf1N1B4_4043	0.40	+0.0
4,496,154	+		Pf1N1B4_4043	0.64	-1.7
4,496,155	-		Pf1N1B4_4043	0.64	-3.4
4,496,428	-				+0.0
4,496,657	-				+0.0
4,496,750	-		Pf1N1B4_4044	0.20	-1.2
4,496,750	-		Pf1N1B4_4044	0.20	-1.5
4,496,750	-		Pf1N1B4_4044	0.20	+0.0
4,497,084	-				-2.2