Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3070

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
3,451,260	+				-1.8
3,451,261	-				+0.0
3,451,299	+				+0.0
3,451,303	+				-1.8
3,451,303	+				+0.0
3,451,303	+				-0.4
3,451,304	-				+0.0
3,451,304	-				-2.6
3,451,335	+				-1.1
3,451,336	-				+0.0
3,451,337	+				+0.0
3,451,337	+				+0.0
3,451,337	+				-1.1
3,451,337	+				-2.0
3,451,338	-				+0.0
3,451,354	+				+0.0
3,451,367	+				+0.0
3,451,368	-				+0.0
3,451,371	+				+0.0
3,451,371	+				-1.8
3,451,371	+				+0.0
3,451,371	+				-2.0
3,451,371	+				-0.5
3,451,371	+				+0.0
3,451,371	+				+0.0
3,451,372	-				+0.0
3,451,372	-				+0.0
3,451,372	-				+0.0
3,451,372	-				+0.0
3,451,372	-				-0.4
3,451,372	-				-0.7
3,451,372	-				+0.0
3,451,372	-				-1.2
3,451,372	-				-0.5
3,451,376	-				+0.0
3,451,427	+		Pf1N1B4_3068	0.24	-1.5
3,451,472	+		Pf1N1B4_3068	0.46	+0.0
3,451,529	+		Pf1N1B4_3068	0.73	+0.0
3,451,529	+		Pf1N1B4_3068	0.73	-0.4
3,451,575	+				-1.9
3,451,575	+				+0.0
3,451,575	+				-1.4
3,451,575	+				-1.3
3,451,576	-				+0.0
3,451,576	-				+0.0
3,451,576	-				-2.9
3,451,576	-				+0.0
3,451,576	-				+0.0
3,451,576	-				+0.0
3,451,958	+		Pf1N1B4_3069	0.68	+1.0
3,451,958	+		Pf1N1B4_3069	0.68	+0.0
3,451,959	-		Pf1N1B4_3069	0.68	-2.7
3,451,959	-		Pf1N1B4_3069	0.68	+0.0
3,452,030	+		Pf1N1B4_3069	0.87	+0.0
3,452,030	+		Pf1N1B4_3069	0.87	+0.0
3,452,030	+		Pf1N1B4_3069	0.87	-1.3
3,452,031	-		Pf1N1B4_3069	0.87	+0.0
3,452,054	+				-0.7
3,452,181	-				+0.0
3,452,411	+		Pf1N1B4_3070	0.30	+0.0
3,452,412	-		Pf1N1B4_3070	0.31	-2.2
3,452,412	-		Pf1N1B4_3070	0.31	+0.0
3,452,481	+		Pf1N1B4_3070	0.39	+0.0
3,452,482	-		Pf1N1B4_3070	0.39	+0.0
3,452,690	+		Pf1N1B4_3070	0.65	+0.0
3,452,690	+		Pf1N1B4_3070	0.65	+0.0
3,452,690	+		Pf1N1B4_3070	0.65	-2.7
3,452,690	+		Pf1N1B4_3070	0.65	-3.2
3,452,690	+		Pf1N1B4_3070	0.65	+0.0
3,452,691	-		Pf1N1B4_3070	0.65	+0.0
3,452,691	-		Pf1N1B4_3070	0.65	+0.0
3,452,693	+		Pf1N1B4_3070	0.65	+0.0
3,452,693	+		Pf1N1B4_3070	0.65	+0.0
3,452,694	-		Pf1N1B4_3070	0.65	-1.0
3,452,694	-		Pf1N1B4_3070	0.65	+0.0
3,452,736	-		Pf1N1B4_3070	0.71	+0.0
3,452,778	-		Pf1N1B4_3070	0.76	+0.0
3,452,850	+		Pf1N1B4_3070	0.85	+0.0
3,452,850	+		Pf1N1B4_3070	0.85	-2.0
3,452,850	+				+0.0
3,452,851	-		Pf1N1B4_3070	0.85	+0.0
3,452,851	-		Pf1N1B4_3070	0.85	-2.0
3,452,851	-				+0.0