Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2430

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
2,754,346	+		Pf1N1B4_2429	0.18	-2.0
2,754,346	+		Pf1N1B4_2429	0.18	-0.0
2,754,346	+		Pf1N1B4_2429	0.18	-0.0
2,754,346	+		Pf1N1B4_2429	0.18	-1.3
2,754,347	-		Pf1N1B4_2429	0.19	-2.8
2,754,347	-		Pf1N1B4_2429	0.19	-0.0
2,754,424	+		Pf1N1B4_2429	0.27	-0.0
2,754,424	+		Pf1N1B4_2429	0.27	-1.8
2,754,424	+		Pf1N1B4_2429	0.27	-0.0
2,754,425	-		Pf1N1B4_2429	0.27	-0.0
2,754,425	-		Pf1N1B4_2429	0.27	-2.1
2,754,425	-		Pf1N1B4_2429	0.27	-0.0
2,754,425	-		Pf1N1B4_2429	0.27	-1.8
2,754,438	-		Pf1N1B4_2429	0.28	-1.9
2,754,577	-				-0.0
2,754,752	-		Pf1N1B4_2429	0.60	-0.0
2,755,035	+		Pf1N1B4_2429	0.90	-1.9
2,755,125	-				-0.0
2,755,144	+				-2.9
2,755,145	-				-0.0
2,755,256	+				-2.7
2,755,256	+				-1.6
2,755,256	+				-0.0
2,755,263	+				-0.0
2,755,263	+				-1.3
2,755,263	+				-0.0
2,755,264	-				-2.5
2,755,264	-				-0.0
2,755,736	+		Pf1N1B4_2430	0.52	-2.4
2,755,736	+		Pf1N1B4_2430	0.52	-0.0
2,755,736	+		Pf1N1B4_2430	0.52	-2.6
2,755,736	+		Pf1N1B4_2430	0.52	-3.3
2,755,736	+		Pf1N1B4_2430	0.52	-5.0
2,755,736	+		Pf1N1B4_2430	0.52	-0.0
2,755,736	+		Pf1N1B4_2430	0.52	-0.0
2,755,736	+		Pf1N1B4_2430	0.52	-2.0
2,755,736	+		Pf1N1B4_2430	0.52	-0.0
2,755,737	-		Pf1N1B4_2430	0.52	-2.7
2,755,737	-		Pf1N1B4_2430	0.52	-1.8
2,755,737	-		Pf1N1B4_2430	0.52	-0.0
2,755,737	-		Pf1N1B4_2430	0.52	-1.5
2,756,186	-				-0.8
2,756,186	-				-0.0
2,756,186	-				-0.0
2,756,237	+				-0.0
2,756,237	+				-0.0
2,756,238	-				-2.1
2,756,238	-				-0.0
2,756,411	+		Pf1N1B4_2431	0.19	-0.0
2,756,411	+		Pf1N1B4_2431	0.19	-0.0
2,756,412	-		Pf1N1B4_2431	0.19	-1.2
2,756,534	+		Pf1N1B4_2431	0.32	-2.9
2,756,534	+		Pf1N1B4_2431	0.32	-1.7
2,756,535	-		Pf1N1B4_2431	0.32	-0.0
2,756,535	-		Pf1N1B4_2431	0.32	-0.0
2,756,535	-		Pf1N1B4_2431	0.32	-0.0
2,756,535	-		Pf1N1B4_2431	0.32	-0.0
2,756,535	-		Pf1N1B4_2431	0.32	-0.0
2,756,739	-		Pf1N1B4_2431	0.53	-0.0
2,756,810	+		Pf1N1B4_2431	0.61	-1.2
2,756,810	+		Pf1N1B4_2431	0.61	-0.0
2,756,811	-		Pf1N1B4_2431	0.61	-0.0
2,757,006	-		Pf1N1B4_2431	0.81	-0.0
2,757,006	-		Pf1N1B4_2431	0.81	-0.0