Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2407

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
2,725,808	+				-2.0
2,725,808	+				-0.0
2,725,808	+				-0.0
2,725,843	+				-1.5
2,725,873	+				-0.0
2,725,873	+				-0.0
2,725,873	+				-2.4
2,725,874	-				-0.0
2,725,874	-				-2.4
2,725,874	-				-0.0
2,725,874	-				-0.0
2,725,874	-				-1.1
2,725,973	-				-2.2
2,725,973	-				-1.4
2,726,026	+				-0.0
2,726,026	+				-0.0
2,726,026	+				-0.0
2,726,026	+				-2.0
2,726,047	-				-0.4
2,726,047	-				-1.8
2,726,152	+		Pf1N1B4_2406	0.29	-2.0
2,726,152	+		Pf1N1B4_2406	0.29	-0.0
2,726,152	+		Pf1N1B4_2406	0.29	-0.0
2,726,152	+				-0.0
2,726,152	+		Pf1N1B4_2406	0.29	-0.0
2,726,153	-		Pf1N1B4_2406	0.29	-0.0
2,726,153	-		Pf1N1B4_2406	0.29	-1.8
2,726,158	+		Pf1N1B4_2406	0.30	-0.0
2,726,158	+		Pf1N1B4_2406	0.30	-0.0
2,726,158	+		Pf1N1B4_2406	0.30	-1.4
2,726,158	+		Pf1N1B4_2406	0.30	-0.0
2,726,158	+		Pf1N1B4_2406	0.30	-0.0
2,726,182	+		Pf1N1B4_2406	0.35	-0.0
2,726,183	-		Pf1N1B4_2406	0.35	-0.0
2,726,416	+		Pf1N1B4_2406	0.82	-1.0
2,726,416	+				-1.3
2,726,416	+		Pf1N1B4_2406	0.82	-3.4
2,726,416	+		Pf1N1B4_2406	0.82	-0.0
2,726,417	-		Pf1N1B4_2406	0.83	-0.0
2,726,468	+				-0.5
2,726,469	-				-1.5
2,726,469	-				-0.0
2,726,469	-				-0.0
2,726,469	-				-2.4
2,726,469	-				-1.0
2,726,469	-				-1.4
2,726,469	-				-0.8
2,726,476	+				-0.0
2,726,476	+				-0.0
2,726,476	+				-0.6
2,726,476	+				-2.2
2,726,477	-				-0.0
2,726,493	+				-0.7
2,726,500	+				-2.3
2,726,500	+				-0.0
2,726,500	+				-0.0
2,726,500	+				-0.0
2,726,500	+				-0.0
2,726,500	+				-1.7
2,726,500	+				-1.7
2,726,500	+				-0.0
2,726,500	+				+0.2
2,726,500	+				-0.0
2,726,501	-				-1.0
2,726,501	-				-1.3
2,726,501	-				-1.6
2,726,501	-				-1.9
2,726,586	+				-0.0
2,726,586	+				-0.0
2,726,586	+				-0.0
2,726,587	-				-0.0
2,726,589	+				-0.0
2,726,589	+				-3.0
2,726,589	+				-0.0
2,726,645	+		Pf1N1B4_2407	0.14	-1.0
2,726,645	+		Pf1N1B4_2407	0.14	-0.0
2,726,645	+		Pf1N1B4_2407	0.14	-0.0
2,726,645	+		Pf1N1B4_2407	0.14	-2.9
2,726,645	+		Pf1N1B4_2407	0.14	-2.5
2,726,646	-		Pf1N1B4_2407	0.14	-0.0
2,726,646	-		Pf1N1B4_2407	0.14	-0.0
2,726,655	-		Pf1N1B4_2407	0.18	-0.0
2,726,860	+		Pf1N1B4_2407	0.87	-2.4
2,726,860	+		Pf1N1B4_2407	0.87	-0.0
2,726,860	+		Pf1N1B4_2407	0.87	-2.1
2,726,861	-		Pf1N1B4_2407	0.87	-0.0
2,726,875	+				-0.0
2,726,884	-				-0.0
2,726,902	-				-0.0
2,727,024	+				-0.0
2,727,066	+				-0.0
2,727,103	-		Pf1N1B4_2408	0.18	-1.8
2,727,103	-		Pf1N1B4_2408	0.18	-0.0
2,727,106	-		Pf1N1B4_2408	0.18	-0.0
2,727,106	-		Pf1N1B4_2408	0.18	-2.3
2,727,136	-		Pf1N1B4_2408	0.25	-0.0
2,727,136	-		Pf1N1B4_2408	0.25	-0.0
2,727,136	-		Pf1N1B4_2408	0.25	-0.0
2,727,136	-		Pf1N1B4_2408	0.25	-3.2
2,727,136	-		Pf1N1B4_2408	0.25	-0.0
2,727,136	-		Pf1N1B4_2408	0.25	-0.0
2,727,188	+		Pf1N1B4_2408	0.36	-2.1
2,727,188	+		Pf1N1B4_2408	0.36	-1.8
2,727,189	-		Pf1N1B4_2408	0.37	-2.6
2,727,189	-		Pf1N1B4_2408	0.37	-2.5
2,727,189	-		Pf1N1B4_2408	0.37	-1.3
2,727,264	-		Pf1N1B4_2408	0.53	-0.0
2,727,264	-		Pf1N1B4_2408	0.53	-0.0
2,727,288	+				-1.6
2,727,288	+		Pf1N1B4_2408	0.58	-5.4
2,727,289	-		Pf1N1B4_2408	0.59	-1.7
2,727,289	-		Pf1N1B4_2408	0.59	-2.5
2,727,367	-		Pf1N1B4_2408	0.76	-1.8
2,727,420	+		Pf1N1B4_2408	0.88	-0.0
2,727,420	+		Pf1N1B4_2408	0.88	-0.0
2,727,420	+		Pf1N1B4_2408	0.88	-0.0
2,727,420	+		Pf1N1B4_2408	0.88	-2.4
2,727,420	+		Pf1N1B4_2408	0.88	-2.5
2,727,421	-		Pf1N1B4_2408	0.88	-0.0
2,727,421	-		Pf1N1B4_2408	0.88	-0.0
2,727,421	-		Pf1N1B4_2408	0.88	-0.0
2,727,509	+				-0.0
2,727,509	+				-0.0
2,727,509	+				-0.0
2,727,509	+				-1.9
2,727,509	+				-0.0
2,727,510	-				-1.0
2,727,510	-				-0.0
2,727,510	-				-0.0
2,727,604	+				-0.0
2,727,604	+				-1.3
2,727,605	-				-0.0
2,727,605	-				-2.1
2,727,638	+				-2.6
2,727,639	-				-0.0
2,727,643	+				-1.9
2,727,643	+				-0.0
2,727,643	+				-0.0
2,727,643	+				-0.0
2,727,644	-				-0.0
2,727,644	-				-1.7
2,727,644	-				-1.1
2,727,644	-				-0.0
2,727,644	-				-0.0
2,727,644	-				-0.0
2,727,644	-				-1.4
2,727,649	+				-2.4
2,727,650	-				-1.7
2,727,669	+				-0.0
2,727,887	+		Pf1N1B4_2409	0.21	-2.3