Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2380

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
2,696,041	-		Pf1N1B4_2379	0.23	-0.0
2,696,077	+		Pf1N1B4_2379	0.27	-0.0
2,696,077	+		Pf1N1B4_2379	0.27	-0.0
2,696,077	+		Pf1N1B4_2379	0.27	-0.0
2,696,078	-		Pf1N1B4_2379	0.27	-0.0
2,696,078	-		Pf1N1B4_2379	0.27	-0.0
2,696,078	-		Pf1N1B4_2379	0.27	-0.0
2,696,078	-		Pf1N1B4_2379	0.27	-0.0
2,696,087	+		Pf1N1B4_2379	0.28	-0.0
2,696,119	+		Pf1N1B4_2379	0.32	-0.0
2,696,120	-		Pf1N1B4_2379	0.32	-0.0
2,696,120	-		Pf1N1B4_2379	0.32	-1.1
2,696,120	-		Pf1N1B4_2379	0.32	-1.2
2,696,121	+		Pf1N1B4_2379	0.32	-0.0
2,696,121	+		Pf1N1B4_2379	0.32	-0.0
2,696,121	+		Pf1N1B4_2379	0.32	-0.0
2,696,121	+				-0.0
2,696,121	+		Pf1N1B4_2379	0.32	-1.8
2,696,122	-		Pf1N1B4_2379	0.32	-2.1
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,122	-		Pf1N1B4_2379	0.32	-0.0
2,696,149	+		Pf1N1B4_2379	0.35	-2.8
2,696,163	+		Pf1N1B4_2379	0.36	-0.0
2,696,163	+		Pf1N1B4_2379	0.36	-1.2
2,696,219	+		Pf1N1B4_2379	0.42	-2.4
2,696,265	+		Pf1N1B4_2379	0.47	-0.0
2,696,265	+		Pf1N1B4_2379	0.47	-2.5
2,696,266	-		Pf1N1B4_2379	0.47	-2.4
2,696,300	+		Pf1N1B4_2379	0.51	-0.0
2,696,300	+		Pf1N1B4_2379	0.51	-0.0
2,696,300	+		Pf1N1B4_2379	0.51	-0.0
2,696,301	-		Pf1N1B4_2379	0.51	-0.0
2,696,340	+		Pf1N1B4_2379	0.55	-1.9
2,696,340	+		Pf1N1B4_2379	0.55	-0.0
2,696,341	-		Pf1N1B4_2379	0.55	-0.0
2,696,341	-		Pf1N1B4_2379	0.55	-1.5
2,696,375	-		Pf1N1B4_2379	0.59	-0.0
2,696,394	+		Pf1N1B4_2379	0.61	-2.4
2,696,394	+		Pf1N1B4_2379	0.61	-1.8
2,696,394	+		Pf1N1B4_2379	0.61	-1.6
2,696,394	+		Pf1N1B4_2379	0.61	-3.0
2,696,394	+		Pf1N1B4_2379	0.61	-1.9
2,696,394	+		Pf1N1B4_2379	0.61	-2.6
2,696,394	+		Pf1N1B4_2379	0.61	-0.0
2,696,394	+		Pf1N1B4_2379	0.61	-0.0
2,696,395	-		Pf1N1B4_2379	0.61	-0.0
2,696,395	-		Pf1N1B4_2379	0.61	-0.0
2,696,464	+		Pf1N1B4_2379	0.69	-2.4
2,696,464	+		Pf1N1B4_2379	0.69	-1.6
2,696,465	-		Pf1N1B4_2379	0.69	-0.0
2,696,465	-		Pf1N1B4_2379	0.69	-0.0
2,696,465	-		Pf1N1B4_2379	0.69	-0.0
2,696,466	+		Pf1N1B4_2379	0.69	-0.0
2,696,466	+		Pf1N1B4_2379	0.69	-1.8
2,696,466	+		Pf1N1B4_2379	0.69	-0.0
2,696,476	+		Pf1N1B4_2379	0.70	-0.0
2,696,506	-		Pf1N1B4_2379	0.73	-0.0
2,696,506	-		Pf1N1B4_2379	0.73	-0.0
2,696,506	-		Pf1N1B4_2379	0.73	-2.0
2,696,517	+		Pf1N1B4_2379	0.74	-1.8
2,696,517	+		Pf1N1B4_2379	0.74	-0.0
2,696,517	+		Pf1N1B4_2379	0.74	-1.5
2,696,517	+		Pf1N1B4_2379	0.74	-2.6
2,696,517	+		Pf1N1B4_2379	0.74	-0.0
2,696,517	+		Pf1N1B4_2379	0.74	-0.0
2,696,517	+		Pf1N1B4_2379	0.74	-2.0
2,696,517	+		Pf1N1B4_2379	0.74	-1.5
2,696,517	+		Pf1N1B4_2379	0.74	-0.0
2,696,517	+		Pf1N1B4_2379	0.74	-1.6
2,696,517	+		Pf1N1B4_2379	0.74	-1.5
2,696,517	+		Pf1N1B4_2379	0.74	-1.7
2,696,517	+		Pf1N1B4_2379	0.74	-0.0
2,696,517	+		Pf1N1B4_2379	0.74	-0.0
2,696,518	-		Pf1N1B4_2379	0.74	-0.0
2,696,518	-		Pf1N1B4_2379	0.74	-2.4
2,696,518	-		Pf1N1B4_2379	0.74	-0.0
2,696,518	-		Pf1N1B4_2379	0.74	-0.0
2,696,518	-		Pf1N1B4_2379	0.74	-0.0
2,696,631	+		Pf1N1B4_2379	0.87	-0.0
2,696,631	+		Pf1N1B4_2379	0.87	-0.0
2,696,631	+		Pf1N1B4_2379	0.87	-1.8
2,696,631	+		Pf1N1B4_2379	0.87	-0.0
2,696,711	+				-0.0
2,696,758	+				-0.0
2,696,758	+				-0.0
2,696,758	+				-0.0
2,696,758	+				-2.8
2,696,758	+				-2.8
2,696,758	+				-0.8
2,696,759	-				-0.0
2,696,836	+				-0.0
2,696,837	-				-0.0
2,696,837	-				-2.2
2,696,837	-				-0.0
2,696,837	-				-0.0
2,696,837	-				-1.9
2,696,837	-				-2.8
2,696,858	-				-0.0
2,696,858	-				-1.9
2,696,871	-				-0.0
2,696,871	-				-2.8
2,696,871	-				-2.4
2,696,895	+				-0.0
2,696,896	-				-3.0
2,696,924	+				-0.0
2,696,924	+				-1.1
2,696,924	+				-1.7
2,696,924	+				-1.2
2,696,924	+				-2.9
2,696,924	+				-0.0
2,696,924	+				-0.0
2,696,925	-				-2.5
2,696,925	-				+0.5
2,696,925	-				-3.0
2,696,925	-				-0.0
2,696,925	-				-2.3
2,696,925	-				-2.7
2,696,925	-				-2.5
2,696,925	-				-0.0
2,696,925	-				-2.0
2,696,925	-				-0.0
2,696,963	-				-2.4
2,696,988	-				-3.0
2,696,999	+				-0.0
2,696,999	+				-1.4
2,697,000	-				-2.6
2,697,000	-				-2.5
2,697,000	-				-4.1
2,697,000	-				-1.6
2,697,000	-				-2.6
2,697,000	-				+0.2
2,697,000	-				-0.0
2,697,000	-				-2.0
2,697,000	-				-2.4
2,697,008	-				-3.1
2,697,008	-				-2.4
2,697,026	+				-0.7
2,697,048	+				-3.7
2,697,048	+				-0.0
2,697,048	+				-0.0
2,697,048	+				-2.9
2,697,048	+				-1.4
2,697,048	+				-0.0
2,697,048	+				-0.0
2,697,048	+				-1.2
2,697,048	+				-0.0
2,697,048	+				-0.0
2,697,049	-				-2.9
2,697,049	-				-3.0
2,697,049	-				-1.5
2,697,049	-				-2.4
2,697,049	-				-4.2
2,697,049	-				-1.4
2,697,049	-				-3.4
2,697,049	-				-2.2
2,697,049	-				-3.5
2,697,049	-				-3.5
2,697,049	-				-2.2
2,697,049	-				-4.2
2,697,049	-				-3.1
2,697,049	-				-2.6
2,697,052	+				-0.0
2,697,052	+				-2.0
2,697,052	+				-0.0
2,697,052	+				-0.0
2,697,052	+				-0.0
2,697,052	+				-0.0
2,697,053	-				-0.0
2,697,053	-				-4.5
2,697,053	-				-2.3
2,697,053	-				-3.1
2,697,053	-				-2.5
2,697,053	-				-2.3
2,697,053	-				-2.7
2,697,053	-				-0.0
2,697,053	-				-1.7
2,697,053	-				-2.6
2,697,053	-				-3.8
2,697,053	-				-0.0
2,697,053	-				-2.6
2,697,053	-				-0.0
2,697,053	-				-2.7
2,697,053	-				-3.2
2,697,053	-				-1.9
2,697,053	-				-0.0
2,697,053	-				-0.6
2,697,053	-				-0.0
2,697,053	-				-0.0
2,697,053	-				-4.0
2,697,053	-				-0.0
2,697,053	-				-3.0
2,697,053	-				-2.8
2,697,053	-				-0.2
2,697,053	-				-2.7
2,697,053	-				-2.1
2,697,053	-				-0.0
2,697,116	+		Pf1N1B4_2380	0.14	-0.0
2,697,116	+		Pf1N1B4_2380	0.14	-0.0
2,697,117	-		Pf1N1B4_2380	0.14	-3.0
2,697,117	-		Pf1N1B4_2380	0.14	-2.6
2,697,117	-		Pf1N1B4_2380	0.14	-2.5
2,697,117	-		Pf1N1B4_2380	0.14	-2.3
2,697,117	-		Pf1N1B4_2380	0.14	-2.7
2,697,117	-		Pf1N1B4_2380	0.14	-0.7
2,697,117	-		Pf1N1B4_2380	0.14	-0.0
2,697,117	-		Pf1N1B4_2380	0.14	-3.1
2,697,117	-		Pf1N1B4_2380	0.14	+1.5
2,697,117	-		Pf1N1B4_2380	0.14	-3.3
2,697,117	-		Pf1N1B4_2380	0.14	-3.0
2,697,117	-		Pf1N1B4_2380	0.14	-2.0
2,697,117	-		Pf1N1B4_2380	0.14	-0.0
2,697,117	-		Pf1N1B4_2380	0.14	-0.0
2,697,158	+		Pf1N1B4_2380	0.21	-0.0
2,697,159	-		Pf1N1B4_2380	0.21	-3.2
2,697,159	-		Pf1N1B4_2380	0.21	-3.8
2,697,159	-		Pf1N1B4_2380	0.21	-0.0
2,697,159	-		Pf1N1B4_2380	0.21	-2.3
2,697,159	-		Pf1N1B4_2380	0.21	-1.8
2,697,161	+		Pf1N1B4_2380	0.22	-0.0
2,697,161	+		Pf1N1B4_2380	0.22	-0.0
2,697,161	+		Pf1N1B4_2380	0.22	-0.0
2,697,162	-		Pf1N1B4_2380	0.22	-2.2
2,697,162	-		Pf1N1B4_2380	0.22	-5.0
2,697,162	-		Pf1N1B4_2380	0.22	-0.0
2,697,162	-		Pf1N1B4_2380	0.22	-4.4
2,697,162	-		Pf1N1B4_2380	0.22	-2.7
2,697,162	-		Pf1N1B4_2380	0.22	-3.0
2,697,162	-		Pf1N1B4_2380	0.22	-0.0
2,697,162	-		Pf1N1B4_2380	0.22	-0.0
2,697,162	-		Pf1N1B4_2380	0.22	-2.9
2,697,162	-		Pf1N1B4_2380	0.22	-1.0
2,697,162	-		Pf1N1B4_2380	0.22	-0.0
2,697,162	-		Pf1N1B4_2380	0.22	-2.1
2,697,162	-		Pf1N1B4_2380	0.22	-2.4
2,697,284	+		Pf1N1B4_2380	0.44	-0.0
2,697,284	+		Pf1N1B4_2380	0.44	-0.0
2,697,284	+		Pf1N1B4_2380	0.44	-0.0
2,697,284	+		Pf1N1B4_2380	0.44	-1.2
2,697,285	-		Pf1N1B4_2380	0.44	-2.1
2,697,285	-		Pf1N1B4_2380	0.44	-3.0
2,697,285	-		Pf1N1B4_2380	0.44	-2.2
2,697,285	-		Pf1N1B4_2380	0.44	-2.5
2,697,285	-		Pf1N1B4_2380	0.44	-1.8
2,697,285	-		Pf1N1B4_2380	0.44	-3.4
2,697,285	-		Pf1N1B4_2380	0.44	+0.1
2,697,285	-		Pf1N1B4_2380	0.44	-0.0
2,697,285	-		Pf1N1B4_2380	0.44	-0.0
2,697,286	+		Pf1N1B4_2380	0.44	-0.0
2,697,287	-		Pf1N1B4_2380	0.45	-3.4
2,697,332	+		Pf1N1B4_2380	0.53	-0.0
2,697,332	+		Pf1N1B4_2380	0.53	-2.2
2,697,333	-		Pf1N1B4_2380	0.53	-2.1
2,697,333	-		Pf1N1B4_2380	0.53	-0.0
2,697,333	-		Pf1N1B4_2380	0.53	-0.0
2,697,333	-		Pf1N1B4_2380	0.53	-2.9
2,697,333	-		Pf1N1B4_2380	0.53	-0.0
2,697,333	-		Pf1N1B4_2380	0.53	-2.4
2,697,479	+		Pf1N1B4_2380	0.79	-0.0
2,697,480	-				+1.6
2,697,480	-		Pf1N1B4_2380	0.80	-3.1
2,697,480	-		Pf1N1B4_2380	0.80	-1.7
2,697,480	-		Pf1N1B4_2380	0.80	-2.4
2,697,480	-		Pf1N1B4_2380	0.80	-3.0
2,697,480	-		Pf1N1B4_2380	0.80	-2.0
2,697,480	-		Pf1N1B4_2380	0.80	-2.6
2,697,480	-		Pf1N1B4_2380	0.80	-0.0
2,697,480	-		Pf1N1B4_2380	0.80	-2.1
2,697,480	-		Pf1N1B4_2380	0.80	-4.7
2,697,480	-		Pf1N1B4_2380	0.80	-2.6
2,697,480	-		Pf1N1B4_2380	0.80	-2.3
2,697,499	-		Pf1N1B4_2380	0.83	-0.0
2,697,499	-		Pf1N1B4_2380	0.83	-2.8
2,697,545	-				-0.0
2,697,545	-				-3.0
2,697,545	-				-3.0
2,697,598	+				-0.0
2,697,599	-				-2.2
2,697,599	-				-3.2
2,697,599	-				-3.3
2,697,599	-				-3.0
2,697,599	-				-2.8
2,697,599	-				-2.9
2,697,599	-				-0.0
2,697,599	-				-2.5
2,697,617	+				-0.0
2,697,617	+				-0.0
2,697,617	+				-1.9
2,697,617	+				+1.4
2,697,618	-				-0.0
2,697,618	-				-2.3
2,697,618	-				-2.9
2,697,618	-				-3.4
2,697,618	-				-0.0
2,697,618	-				-2.8
2,697,683	+				-1.5
2,697,683	+				-0.5
2,697,683	+				-1.8
2,697,683	+				-0.0
2,697,684	-				-3.2
2,697,684	-				-3.4
2,697,684	-				-2.6
2,697,684	-				-0.0
2,697,684	-				-2.6
2,697,684	-				-2.5
2,697,684	-				-2.7
2,697,684	-				-2.0
2,697,684	-				-0.0
2,697,684	-				-2.4
2,697,684	-				-2.2
2,697,684	-				-2.2
2,697,684	-				-0.0
2,697,684	-				-2.9
2,697,684	-				-0.0
2,697,684	-				-1.9
2,697,684	-				-0.0
2,697,684	-				-0.0
2,697,697	+		Pf1N1B4_2381	0.12	-0.0
2,697,697	+		Pf1N1B4_2381	0.12	-0.0
2,697,698	-		Pf1N1B4_2381	0.12	-1.0
2,697,698	-		Pf1N1B4_2381	0.12	-0.0
2,697,698	-		Pf1N1B4_2381	0.12	-1.6
2,697,698	-		Pf1N1B4_2381	0.12	-1.8
2,697,698	-		Pf1N1B4_2381	0.12	-3.7
2,697,698	-		Pf1N1B4_2381	0.12	-2.4
2,697,698	-		Pf1N1B4_2381	0.12	-3.4
2,697,698	-		Pf1N1B4_2381	0.12	-3.3
2,697,698	-		Pf1N1B4_2381	0.12	-1.8
2,697,698	-		Pf1N1B4_2381	0.12	-3.0
2,697,698	-		Pf1N1B4_2381	0.12	-0.0
2,697,698	-		Pf1N1B4_2381	0.12	-2.8
2,697,698	-		Pf1N1B4_2381	0.12	-3.1
2,697,763	+		Pf1N1B4_2381	0.23	-0.0
2,697,763	+		Pf1N1B4_2381	0.23	-2.3
2,697,763	+		Pf1N1B4_2381	0.23	-0.0
2,697,763	+		Pf1N1B4_2381	0.23	-1.8
2,697,763	+		Pf1N1B4_2381	0.23	-0.0
2,697,763	+		Pf1N1B4_2381	0.23	-1.4
2,697,763	+		Pf1N1B4_2381	0.23	-0.0
2,697,763	+		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-2.4
2,697,764	-		Pf1N1B4_2381	0.23	-2.3
2,697,764	-		Pf1N1B4_2381	0.23	-4.1
2,697,764	-		Pf1N1B4_2381	0.23	-2.9
2,697,764	-		Pf1N1B4_2381	0.23	-2.3
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-5.1
2,697,764	-		Pf1N1B4_2381	0.23	-3.2
2,697,764	-		Pf1N1B4_2381	0.23	-3.8
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-0.7
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-3.0
2,697,764	-		Pf1N1B4_2381	0.23	-5.0
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-3.5
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-2.4
2,697,764	-		Pf1N1B4_2381	0.23	-3.6
2,697,764	-		Pf1N1B4_2381	0.23	-2.6
2,697,764	-				-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-2.1
2,697,764	-		Pf1N1B4_2381	0.23	-3.2
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-2.7
2,697,764	-		Pf1N1B4_2381	0.23	-3.1
2,697,764	-		Pf1N1B4_2381	0.23	-0.0
2,697,764	-		Pf1N1B4_2381	0.23	-2.5
2,697,764	-		Pf1N1B4_2381	0.23	-3.0
2,697,764	-		Pf1N1B4_2381	0.23	-2.1
2,697,764	-		Pf1N1B4_2381	0.23	-2.8
2,697,764	-		Pf1N1B4_2381	0.23	-2.9
2,697,764	-		Pf1N1B4_2381	0.23	-2.6
2,697,764	-		Pf1N1B4_2381	0.23	-3.1
2,697,764	-		Pf1N1B4_2381	0.23	-2.0
2,697,774	+		Pf1N1B4_2381	0.25	-0.0
2,698,004	+		Pf1N1B4_2381	0.64	-0.0
2,698,005	-		Pf1N1B4_2381	0.64	-3.6
2,698,094	-		Pf1N1B4_2381	0.79	-2.5
2,698,187	-				-2.3
2,698,187	-				-0.0
2,698,187	-				-2.3
2,698,187	-				-2.4
2,698,187	-				-2.7
2,698,187	-				-0.0
2,698,187	-				-0.0
2,698,187	-				-2.8
2,698,187	-				-2.8
2,698,187	-				-3.4
2,698,187	-				-2.3
2,698,187	-				-4.0
2,698,187	-				-0.8
2,698,187	-				-0.0
2,698,187	-				-3.3
2,698,187	-				+1.1
2,698,187	-				-0.0
2,698,187	-				+0.6
2,698,187	-				-2.2
2,698,187	-				-6.3
2,698,187	-				-2.0
2,698,187	-				-2.4
2,698,187	-				-0.0
2,698,187	-				-0.0
2,698,187	-				-3.1
2,698,187	-				-2.8
2,698,187	-				-0.0
2,698,191	+				-2.1
2,698,191	+				-0.0
2,698,192	-				-0.0
2,698,192	-				-0.0
2,698,192	-				-0.0
2,698,192	-				-0.0
2,698,192	-				-0.0
2,698,192	-				-0.0
2,698,192	-				-2.9
2,698,192	-				-0.0
2,698,192	-				-2.8
2,698,192	-				-1.9
2,698,192	-				-2.5
2,698,192	-				-2.8
2,698,192	-				-2.0
2,698,192	-				-0.0
2,698,192	-				-2.6
2,698,192	-				-2.6
2,698,192	-				-2.8
2,698,192	-				-0.0
2,698,192	-				-0.0
2,698,192	-				-2.9
2,698,192	-				-0.0
2,698,350	+				-0.0
2,698,351	-				-2.3
2,698,352	+				-1.7
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.6
2,698,352	+				-1.1
2,698,352	+				-2.8
2,698,352	+				-2.5
2,698,352	+				-0.9
2,698,352	+				-2.1
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-1.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-1.1
2,698,352	+				-0.0
2,698,352	+				-0.0
2,698,352	+				-1.6
2,698,353	-				-0.0
2,698,353	-				-2.1
2,698,353	-				-0.0
2,698,353	-				-0.0
2,698,353	-				-0.0
2,698,353	-				-0.0
2,698,353	-				-0.0
2,698,353	-				-0.0
2,698,353	-				-0.0
2,698,463	+				-1.7
2,698,463	+				-1.5