Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2096

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
2,402,858	+		Pf1N1B4_2095	0.78	-1.5
2,402,858	+		Pf1N1B4_2095	0.78	-3.0
2,402,911	+		Pf1N1B4_2095	0.80	+0.0
2,402,911	+		Pf1N1B4_2095	0.80	+0.0
2,402,918	-		Pf1N1B4_2095	0.80	+0.0
2,402,947	+		Pf1N1B4_2095	0.81	-1.6
2,402,948	-		Pf1N1B4_2095	0.81	-1.3
2,402,956	+		Pf1N1B4_2095	0.81	+0.0
2,402,957	-		Pf1N1B4_2095	0.81	+0.0
2,402,957	-		Pf1N1B4_2095	0.81	-2.0
2,403,076	+		Pf1N1B4_2095	0.85	+0.0
2,403,076	+		Pf1N1B4_2095	0.85	-1.0
2,403,076	+		Pf1N1B4_2095	0.85	-1.0
2,403,076	+		Pf1N1B4_2095	0.85	-1.6
2,403,076	+		Pf1N1B4_2095	0.85	+0.0
2,403,076	+		Pf1N1B4_2095	0.85	+0.0
2,403,076	+		Pf1N1B4_2095	0.85	-1.1
2,403,076	+		Pf1N1B4_2095	0.85	+0.0
2,403,076	+		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	-2.8
2,403,077	-		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	-1.6
2,403,077	-		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	+0.0
2,403,077	-		Pf1N1B4_2095	0.85	-2.6
2,403,077	-		Pf1N1B4_2095	0.85	-1.4
2,403,077	-		Pf1N1B4_2095	0.85	-0.9
2,403,160	+		Pf1N1B4_2095	0.87	+0.0
2,403,160	+		Pf1N1B4_2095	0.87	-1.5
2,403,332	+				+0.0
2,403,538	+				+0.0
2,403,538	+				+0.0
2,403,538	+				-2.7
2,403,539	-				+0.0
2,403,539	-				+0.0
2,403,539	-				+0.0
2,403,539	-				-1.8
2,403,539	-				+0.0
2,403,539	-				+0.0
2,403,539	-				+0.0
2,403,591	+				+0.0
2,403,591	+				+0.0
2,403,592	-				+0.0
2,403,592	-				+0.0
2,403,601	-				+0.0
2,403,990	+		Pf1N1B4_2096	0.51	-2.9
2,403,991	-		Pf1N1B4_2096	0.51	+0.0
2,404,014	+		Pf1N1B4_2096	0.54	+0.0
2,404,014	+		Pf1N1B4_2096	0.54	+0.0
2,404,015	-		Pf1N1B4_2096	0.54	-2.6
2,404,210	-		Pf1N1B4_2096	0.81	+0.0
2,404,210	-		Pf1N1B4_2096	0.81	-1.7
2,404,409	+				+0.0
2,404,409	+				+0.0
2,404,409	+				+0.0
2,404,409	+				+0.0
2,404,410	-				-0.3
2,404,610	+		Pf1N1B4_2097	0.26	+0.0
2,404,610	+		Pf1N1B4_2097	0.26	-1.0
2,404,610	+		Pf1N1B4_2097	0.26	+0.0
2,404,611	-		Pf1N1B4_2097	0.26	+0.0
2,404,611	-		Pf1N1B4_2097	0.26	+0.0
2,404,611	-		Pf1N1B4_2097	0.26	-2.0
2,404,611	-		Pf1N1B4_2097	0.26	-4.3
2,404,627	-		Pf1N1B4_2097	0.28	+0.0
2,404,627	-		Pf1N1B4_2097	0.28	+0.0
2,404,771	+		Pf1N1B4_2097	0.42	+0.0
2,404,884	-		Pf1N1B4_2097	0.53	+0.0
2,405,105	+		Pf1N1B4_2097	0.75	-1.6
2,405,106	-		Pf1N1B4_2097	0.75	+0.0
2,405,126	+		Pf1N1B4_2097	0.77	-2.1
2,405,127	-		Pf1N1B4_2097	0.77	-3.2
2,405,127	-		Pf1N1B4_2097	0.77	+0.0
2,405,127	-		Pf1N1B4_2097	0.77	+0.0
2,405,224	-		Pf1N1B4_2097	0.87	-2.6