Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1675

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
1,918,634	-		Pf1N1B4_1674	0.65	-0.0
1,918,674	+		Pf1N1B4_1674	0.67	-1.1
1,918,859	+		Pf1N1B4_1674	0.75	-0.0
1,918,860	-		Pf1N1B4_1674	0.75	-0.0
1,918,943	+		Pf1N1B4_1674	0.78	-1.1
1,918,944	-		Pf1N1B4_1674	0.78	-1.0
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,028	+		Pf1N1B4_1674	0.82	-0.7
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,028	+		Pf1N1B4_1674	0.82	-3.5
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,028	+		Pf1N1B4_1674	0.82	-2.4
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,028	+		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-3.4
1,919,029	-		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-0.2
1,919,029	-		Pf1N1B4_1674	0.82	-0.9
1,919,029	-		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-0.0
1,919,029	-		Pf1N1B4_1674	0.82	-3.6
1,919,029	-		Pf1N1B4_1674	0.82	-2.4
1,919,102	+				-0.0
1,919,102	+		Pf1N1B4_1674	0.85	-0.0
1,919,102	+		Pf1N1B4_1674	0.85	-0.0
1,919,103	-		Pf1N1B4_1674	0.85	-0.0
1,919,103	-		Pf1N1B4_1674	0.85	-1.0
1,919,103	-		Pf1N1B4_1674	0.85	-1.9
1,919,117	+		Pf1N1B4_1674	0.86	-0.0
1,919,117	+				-2.2
1,919,118	-		Pf1N1B4_1674	0.86	-0.7
1,919,118	-		Pf1N1B4_1674	0.86	-0.0
1,919,118	-		Pf1N1B4_1674	0.86	-3.7
1,919,315	+				-1.1
1,919,315	+				-0.9
1,919,315	+				-0.0
1,919,316	-				-2.0
1,919,316	-				-2.4
1,919,316	-				-1.4
1,919,318	+				-0.0
1,919,371	+				-0.0
1,919,371	+				-0.0
1,919,372	-				-0.0
1,919,505	+				-0.0
1,919,505	+				-0.0
1,919,505	+				-0.0
1,919,911	+		Pf1N1B4_1675	0.37	-0.0
1,919,911	+		Pf1N1B4_1675	0.37	-0.0
1,919,911	+		Pf1N1B4_1675	0.37	-0.0
1,919,912	-		Pf1N1B4_1675	0.37	-0.0
1,919,912	-		Pf1N1B4_1675	0.37	-2.4
1,919,912	-		Pf1N1B4_1675	0.37	-2.8
1,919,912	-		Pf1N1B4_1675	0.37	-0.0
1,920,539	+				-0.0
1,920,539	+				-0.0
1,920,539	+				-0.0
1,920,540	-				-0.0
1,920,551	+				-0.0
1,920,663	+				-1.5
1,920,663	+				-0.0
1,920,663	+				-0.0
1,920,663	+				-0.0
1,920,663	+				-1.9
1,920,663	+				-0.0
1,920,663	+				-0.9
1,920,663	+				-0.0
1,920,663	+				-0.0
1,920,663	+				-0.0
1,920,663	+				-0.0
1,920,664	-				-0.0
1,920,664	-				-0.9
1,920,664	-				-0.0
1,920,664	-				-0.0
1,920,664	-				-0.0
1,920,664	-				-0.0
1,920,665	+				-1.1
1,920,665	+				-1.1
1,920,666	-				-0.0
1,920,666	-				-0.8
1,920,666	-				-0.0
1,920,666	-				-0.0
1,920,676	+				-0.0
1,920,708	-				-0.0
1,920,743	+				-1.7
1,920,852	-				-0.0
1,920,964	+		Pf1N1B4_1676	0.14	-0.0
1,920,964	+		Pf1N1B4_1676	0.14	-0.0
1,920,965	-		Pf1N1B4_1676	0.14	-0.0
1,920,965	-				-1.8
1,920,965	-		Pf1N1B4_1676	0.14	-0.0
1,921,042	+		Pf1N1B4_1676	0.19	-0.0
1,921,096	+		Pf1N1B4_1676	0.23	-1.6
1,921,097	-		Pf1N1B4_1676	0.23	-1.5
1,921,204	+		Pf1N1B4_1676	0.30	-0.0
1,921,204	+		Pf1N1B4_1676	0.30	-0.0
1,921,205	-		Pf1N1B4_1676	0.30	-3.0
1,921,205	-		Pf1N1B4_1676	0.30	-0.0
1,921,282	+		Pf1N1B4_1676	0.35	-0.0
1,921,282	+		Pf1N1B4_1676	0.35	-0.0
1,921,282	+		Pf1N1B4_1676	0.35	-0.0
1,921,283	-		Pf1N1B4_1676	0.35	-0.0