Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1389

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
1,588,755	-				-0.0
1,588,811	+				-0.0
1,588,879	-		Pf1N1B4_1388	0.15	-0.0
1,588,986	+		Pf1N1B4_1388	0.38	-0.0
1,588,986	+		Pf1N1B4_1388	0.38	-0.0
1,588,986	+		Pf1N1B4_1388	0.38	-2.4
1,589,062	+		Pf1N1B4_1388	0.55	-3.3
1,589,063	-		Pf1N1B4_1388	0.56	-0.0
1,589,370	-				-1.4
1,589,370	-				-0.0
1,589,391	+				-0.0
1,589,391	+				-0.0
1,589,392	-				-0.0
1,589,392	-				-0.0
1,589,418	-				-1.6
1,589,495	+				-0.0
1,589,543	+				-0.0
1,589,572	+				-0.0
1,589,572	+				-0.0
1,589,573	-				-0.0
1,589,573	-				-2.5
1,589,599	+				-0.6
1,589,599	+				-0.0
1,589,600	-				-0.0
1,589,600	-				-0.0
1,589,600	-				-0.0
1,589,613	-				-2.1
1,589,627	+				-1.8
1,589,652	+				-1.7
1,589,662	+				-1.2
1,589,913	+		Pf1N1B4_1389	0.52	-0.0
1,589,913	+		Pf1N1B4_1389	0.52	-0.0
1,589,914	-		Pf1N1B4_1389	0.53	-0.0
1,590,014	+		Pf1N1B4_1389	0.70	-0.0
1,590,014	+		Pf1N1B4_1389	0.70	-0.0
1,590,015	-		Pf1N1B4_1389	0.70	-0.0
1,590,055	-		Pf1N1B4_1389	0.77	-0.0
1,590,055	-		Pf1N1B4_1389	0.77	-3.7
1,590,267	-				-0.8
1,590,272	+				-2.4
1,590,272	+				-1.6
1,590,272	+				-1.0
1,590,272	+				-0.0
1,590,272	+				-0.0
1,590,273	-				-0.0
1,590,273	-				-0.0
1,590,276	+				-1.8
1,590,276	+				-0.0
1,590,276	+				-0.0
1,590,276	+				-0.0
1,590,276	+				-2.6
1,590,277	-				-0.0
1,590,277	-				-1.9
1,590,277	-				-1.2
1,590,277	-				-0.0
1,590,350	+		Pf1N1B4_1390	0.47	-1.7
1,590,350	+		Pf1N1B4_1390	0.47	-1.9
1,590,350	+		Pf1N1B4_1390	0.47	-0.0
1,590,350	+		Pf1N1B4_1390	0.47	-3.3
1,590,350	+		Pf1N1B4_1390	0.47	-0.0
1,590,350	+		Pf1N1B4_1390	0.47	-0.0
1,590,350	+		Pf1N1B4_1390	0.47	-1.2
1,590,351	-		Pf1N1B4_1390	0.48	-0.0
1,590,685	+				-0.0
1,590,686	-				-1.1
1,590,686	-				-0.0
1,590,686	-				-2.3
1,590,935	+		Pf1N1B4_1391	0.30	-1.3
1,591,175	+		Pf1N1B4_1391	0.57	-0.0
1,591,175	+		Pf1N1B4_1391	0.57	-0.0
1,591,175	+		Pf1N1B4_1391	0.57	-0.0
1,591,175	+		Pf1N1B4_1391	0.57	-1.7
1,591,175	+		Pf1N1B4_1391	0.57	-0.0
1,591,175	+		Pf1N1B4_1391	0.57	-0.0
1,591,175	+		Pf1N1B4_1391	0.57	-0.0
1,591,175	+		Pf1N1B4_1391	0.57	-0.0
1,591,176	-		Pf1N1B4_1391	0.57	-0.0
1,591,176	-		Pf1N1B4_1391	0.57	-3.1
1,591,176	-		Pf1N1B4_1391	0.57	-0.0
1,591,176	-		Pf1N1B4_1391	0.57	-2.1
1,591,176	-		Pf1N1B4_1391	0.57	-2.1