Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1346

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
1,542,333	-				-2.3
1,542,333	-				+0.0
1,542,333	-				+0.0
1,542,333	-				+0.0
1,542,395	-		Pf1N1B4_1345	0.13	+0.0
1,542,532	+		Pf1N1B4_1345	0.26	+0.0
1,542,532	+		Pf1N1B4_1345	0.26	+0.0
1,542,532	+		Pf1N1B4_1345	0.26	+0.0
1,542,533	-		Pf1N1B4_1345	0.26	+0.0
1,542,533	-		Pf1N1B4_1345	0.26	-2.4
1,542,533	-		Pf1N1B4_1345	0.26	-3.8
1,542,533	-		Pf1N1B4_1345	0.26	+0.0
1,542,721	+		Pf1N1B4_1345	0.44	+0.0
1,542,721	+		Pf1N1B4_1345	0.44	+0.0
1,542,722	-		Pf1N1B4_1345	0.44	-1.5
1,542,722	-		Pf1N1B4_1345	0.44	-0.6
1,543,066	+				+0.0
1,543,066	+		Pf1N1B4_1345	0.76	+0.0
1,543,066	+		Pf1N1B4_1345	0.76	+0.0
1,543,067	-		Pf1N1B4_1345	0.76	+0.0
1,543,067	-		Pf1N1B4_1345	0.76	+0.0
1,543,087	-		Pf1N1B4_1345	0.78	+0.0
1,543,234	+				+0.0
1,543,279	+				+0.0
1,543,279	+				-2.1
1,543,279	+				+0.0
1,543,279	+				+0.0
1,543,280	-				-1.7
1,543,280	-				-3.9
1,543,280	-				+0.0
1,543,280	-				-3.3
1,543,287	+				+0.0
1,543,400	+				+0.0
1,543,533	+		Pf1N1B4_1346	0.24	+0.0
1,543,533	+		Pf1N1B4_1346	0.24	+0.0
1,543,534	-		Pf1N1B4_1346	0.24	-4.0
1,543,892	+		Pf1N1B4_1346	0.65	-2.4
1,543,892	+		Pf1N1B4_1346	0.65	+0.0
1,543,893	-		Pf1N1B4_1346	0.65	+0.0
1,543,893	-		Pf1N1B4_1346	0.65	-2.8
1,544,181	+				+0.0
1,544,181	+				-2.6
1,544,395	-				+0.0
1,544,584	+		Pf1N1B4_1347	0.31	+0.0
1,544,602	-		Pf1N1B4_1347	0.34	+0.0
1,544,943	+		Pf1N1B4_1347	0.83	-1.4
1,544,943	+		Pf1N1B4_1347	0.83	+1.0
1,544,943	+		Pf1N1B4_1347	0.83	+0.0
1,544,944	-		Pf1N1B4_1347	0.83	+0.0
1,544,944	-		Pf1N1B4_1347	0.83	+0.0
1,544,974	-		Pf1N1B4_1347	0.87	+0.0
1,544,974	-		Pf1N1B4_1347	0.87	-1.0
1,545,024	-				+0.0
1,545,024	-				+0.0
1,545,060	+				-1.4
1,545,087	-				+0.0
1,545,087	-				+0.0
1,545,101	+				+0.0
1,545,101	+				+0.0
1,545,101	+				+0.0
1,545,102	-				-1.8
1,545,102	-				+0.0