Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_110

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
113,961	-		Pf1N1B4_108	0.69	-0.0
113,979	-		Pf1N1B4_108	0.70	-0.0
114,116	+		Pf1N1B4_108	0.83	-1.5
114,116	+		Pf1N1B4_108	0.83	-0.0
114,116	+		Pf1N1B4_108	0.83	-2.0
114,116	+		Pf1N1B4_108	0.83	-0.0
114,200	+				-0.0
114,201	-				-0.0
114,234	+				-0.0
114,315	+				-2.2
114,316	-				-0.0
114,494	-		Pf1N1B4_109	0.72	-1.8
114,740	+		Pf1N1B4_110	0.52	-0.0
114,740	+		Pf1N1B4_110	0.52	-0.0
114,741	-		Pf1N1B4_110	0.52	-0.0
114,757	+		Pf1N1B4_110	0.57	-2.4
114,758	-				-0.0
114,758	-		Pf1N1B4_110	0.57	-0.0
114,758	-		Pf1N1B4_110	0.57	-0.0
114,758	-		Pf1N1B4_110	0.57	-0.0
114,758	-		Pf1N1B4_110	0.57	-0.0
114,761	+		Pf1N1B4_110	0.58	-0.0
114,761	+		Pf1N1B4_110	0.58	-2.5
114,762	-		Pf1N1B4_110	0.58	-0.0
114,762	-		Pf1N1B4_110	0.58	-0.0
114,762	-				-0.0
114,896	+				-0.0
115,064	-				-2.5
115,099	+				-2.0
115,099	+				-0.0
115,099	+				-0.0
115,099	+				-0.0
115,099	+				-0.0
115,099	+				-1.3
115,100	-				-1.9
115,100	-				-0.0
115,100	-				-0.0
115,165	-				-0.0
115,198	+				-1.5
115,251	+		Pf1N1B4_111	0.14	-2.5
115,251	+		Pf1N1B4_111	0.14	-0.0
115,251	+		Pf1N1B4_111	0.14	-0.0
115,251	+		Pf1N1B4_111	0.14	-2.1
115,252	-		Pf1N1B4_111	0.14	-0.0
115,252	-		Pf1N1B4_111	0.14	-0.0
115,252	-		Pf1N1B4_111	0.14	-2.6
115,255	+		Pf1N1B4_111	0.14	-0.0
115,255	+				-0.0
115,255	+		Pf1N1B4_111	0.14	-0.6
115,255	+		Pf1N1B4_111	0.14	-0.0
115,256	-		Pf1N1B4_111	0.14	-1.9
115,256	-		Pf1N1B4_111	0.14	-0.0
115,256	-		Pf1N1B4_111	0.14	-0.0
115,256	-		Pf1N1B4_111	0.14	-3.3
115,256	-		Pf1N1B4_111	0.14	-0.0
115,303	-		Pf1N1B4_111	0.20	-1.7
115,303	-		Pf1N1B4_111	0.20	-0.0
115,321	-		Pf1N1B4_111	0.22	-0.0
115,363	+		Pf1N1B4_111	0.27	-0.0
115,482	+		Pf1N1B4_111	0.42	-4.3
115,587	+		Pf1N1B4_111	0.55	-0.0
115,615	-		Pf1N1B4_111	0.58	-1.3
115,615	-		Pf1N1B4_111	0.58	-1.7
115,616	+				-1.1
115,616	+		Pf1N1B4_111	0.58	-2.2
115,617	-		Pf1N1B4_111	0.58	-0.0
115,617	-		Pf1N1B4_111	0.58	-0.0
115,617	-		Pf1N1B4_111	0.58	-1.7
115,665	+		Pf1N1B4_111	0.64	-0.0
115,665	+		Pf1N1B4_111	0.64	-1.3
115,665	+		Pf1N1B4_111	0.64	-0.0
115,665	+		Pf1N1B4_111	0.64	-0.0
115,666	-				-1.0
115,708	-		Pf1N1B4_111	0.69	-0.0