Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_100

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B
104,902	+		Pf1N1B4_99	0.38	-0.0
104,902	+		Pf1N1B4_99	0.38	-2.0
104,903	-		Pf1N1B4_99	0.38	-2.6
104,903	-				-0.0
105,020	-		Pf1N1B4_99	0.49	-0.0
105,192	+		Pf1N1B4_99	0.66	-0.6
105,192	+		Pf1N1B4_99	0.66	-1.8
105,255	+		Pf1N1B4_99	0.72	-0.0
105,268	+		Pf1N1B4_99	0.73	-1.4
105,268	+		Pf1N1B4_99	0.73	-0.0
105,269	-		Pf1N1B4_99	0.73	-0.8
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-2.3
105,302	-				-0.0
105,302	-		Pf1N1B4_99	0.76	-1.8
105,428	-				-1.7
105,657	+				-0.6
105,657	+				-1.9
105,657	+				-0.0
105,658	-				-2.6
105,791	-				-0.0
105,828	-				-0.0
105,828	-				-2.8
105,829	+				-0.0
105,830	-				-3.0
105,830	-				-2.0
105,833	+				-0.0
105,833	+				-0.0
105,833	+				-0.0
105,834	-				-0.0
105,834	-				-1.5
105,834	-				-0.0
105,834	-				-0.0
105,834	-				-2.4
105,834	-				-2.4
105,834	-				-0.0
105,834	-				-0.0
105,845	+				-0.0
105,846	-				-0.0
105,854	+				-2.2
105,885	+		Pf1N1B4_100	0.13	-0.8
105,885	+		Pf1N1B4_100	0.13	-0.0
105,885	+		Pf1N1B4_100	0.13	-0.0
105,886	-		Pf1N1B4_100	0.14	-0.0
106,226	+		Pf1N1B4_101	0.48	-2.2
106,226	+		Pf1N1B4_101	0.48	-0.0
106,227	-		Pf1N1B4_101	0.48	-1.3
106,293	+		Pf1N1B4_101	0.88	-2.0
106,424	+				-0.0
106,424	+				-0.0
106,424	+				-1.7
106,424	+				-0.0
106,428	-				-2.4
106,428	-				-1.0
106,501	+				-2.5
106,502	-				-0.0
106,549	+				-1.5
106,550	-				-0.0
106,677	+				-3.3