Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3094 and Dsui_3095 are separated by 82 nucleotides Dsui_3095 and Dsui_3096 are separated by 121 nucleotides Dsui_3096 and Dsui_3097 are separated by 196 nucleotides
Dsui_3094: Dsui_3094 - putative HD superfamily hydrolase, at 3,312,476 to 3,313,132
_3094
Dsui_3095: Dsui_3095 - Protein of unknown function (DUF2726), at 3,313,215 to 3,313,691
_3095
Dsui_3096: Dsui_3096 - NADH dehydrogenase, FAD-containing subunit, at 3,313,813 to 3,315,132
_3096
Dsui_3097: Dsui_3097 - O-6-methylguanine DNA methyltransferase, at 3,315,329 to 3,316,552
_3097
Position (kb)
3313
3314
3315
3316 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3312.932 kb on - strand, within Dsui_3094 at 3313.001 kb on + strand, within Dsui_3094 at 3313.085 kb on + strand at 3313.150 kb on - strand at 3313.150 kb on - strand at 3313.164 kb on + strand at 3313.222 kb on + strand at 3313.304 kb on + strand at 3313.391 kb on - strand at 3313.484 kb on - strand, within Dsui_3095 at 3313.502 kb on + strand, within Dsui_3095 at 3313.563 kb on - strand, within Dsui_3095 at 3313.563 kb on - strand, within Dsui_3095 at 3313.563 kb on - strand, within Dsui_3095 at 3313.574 kb on - strand, within Dsui_3095 at 3313.700 kb on + strand at 3313.848 kb on + strand at 3313.856 kb on - strand at 3313.919 kb on - strand at 3313.969 kb on - strand, within Dsui_3096 at 3314.090 kb on + strand at 3314.229 kb on - strand, within Dsui_3096 at 3314.297 kb on + strand at 3314.357 kb on + strand at 3314.415 kb on - strand at 3314.428 kb on - strand at 3314.502 kb on - strand at 3314.519 kb on - strand, within Dsui_3096 at 3314.520 kb on - strand, within Dsui_3096 at 3314.533 kb on + strand at 3314.652 kb on - strand, within Dsui_3096 at 3314.658 kb on - strand, within Dsui_3096 at 3314.720 kb on + strand at 3314.768 kb on + strand, within Dsui_3096 at 3314.862 kb on - strand, within Dsui_3096 at 3315.506 kb on + strand, within Dsui_3097 at 3315.531 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 3,312,932 - Dsui_3094 0.69 +0.9 3,313,001 + Dsui_3094 0.80 -0.3 3,313,085 + -0.4 3,313,150 - -0.9 3,313,150 - +0.2 3,313,164 + -0.5 3,313,222 + +0.6 3,313,304 + +2.6 3,313,391 - -1.2 3,313,484 - Dsui_3095 0.56 +2.2 3,313,502 + Dsui_3095 0.60 -0.4 3,313,563 - Dsui_3095 0.73 +0.8 3,313,563 - Dsui_3095 0.73 +0.3 3,313,563 - Dsui_3095 0.73 +0.1 3,313,574 - Dsui_3095 0.75 -0.3 3,313,700 + +1.6 3,313,848 + -1.4 3,313,856 - -1.4 3,313,919 - +1.6 3,313,969 - Dsui_3096 0.12 +0.1 3,314,090 + +0.6 3,314,229 - Dsui_3096 0.32 -2.1 3,314,297 + +2.2 3,314,357 + -2.8 3,314,415 - +0.6 3,314,428 - -1.5 3,314,502 - +0.6 3,314,519 - Dsui_3096 0.53 -0.3 3,314,520 - Dsui_3096 0.54 -2.4 3,314,533 + +2.2 3,314,652 - Dsui_3096 0.64 -0.8 3,314,658 - Dsui_3096 0.64 -0.2 3,314,720 + +0.6 3,314,768 + Dsui_3096 0.72 -0.4 3,314,862 - Dsui_3096 0.79 -1.1 3,315,506 + Dsui_3097 0.14 -0.9 3,315,531 + -1.0
Or see this region's nucleotide sequence