Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2553 and Dsui_2554 are separated by 127 nucleotides Dsui_2554 and Dsui_2555 overlap by 4 nucleotides Dsui_2555 and Dsui_2556 are separated by 87 nucleotides
Dsui_2553: Dsui_2553 - Phage X family/Phage replication protein CRI, at 2,704,500 to 2,705,582
_2553
Dsui_2554: Dsui_2554 - hypothetical protein, at 2,705,710 to 2,705,973
_2554
Dsui_2555: Dsui_2555 - Bacteriophage coat protein B, at 2,705,970 to 2,706,167
_2555
Dsui_2556: Dsui_2556 - hypothetical protein, at 2,706,255 to 2,707,346
_2556
Position (kb)
2705
2706 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2704.815 kb on + strand, within Dsui_2553 at 2704.855 kb on + strand, within Dsui_2553 at 2704.864 kb on - strand, within Dsui_2553 at 2704.869 kb on - strand, within Dsui_2553 at 2705.024 kb on - strand, within Dsui_2553 at 2705.077 kb on + strand, within Dsui_2553 at 2705.335 kb on + strand, within Dsui_2553 at 2705.527 kb on - strand at 2705.577 kb on + strand at 2705.680 kb on - strand at 2705.681 kb on - strand at 2705.753 kb on - strand, within Dsui_2554 at 2705.824 kb on + strand, within Dsui_2554 at 2705.894 kb on + strand, within Dsui_2554 at 2705.939 kb on + strand at 2706.007 kb on + strand, within Dsui_2555 at 2706.015 kb on - strand, within Dsui_2555 at 2706.043 kb on - strand, within Dsui_2555 at 2706.146 kb on - strand, within Dsui_2555 at 2706.170 kb on + strand at 2706.516 kb on - strand, within Dsui_2556 at 2706.542 kb on - strand, within Dsui_2556 at 2706.542 kb on - strand, within Dsui_2556 at 2706.542 kb on - strand at 2706.598 kb on - strand at 2706.666 kb on - strand, within Dsui_2556 at 2706.701 kb on + strand, within Dsui_2556 at 2706.737 kb on - strand, within Dsui_2556 at 2706.757 kb on + strand, within Dsui_2556 at 2706.896 kb on - strand, within Dsui_2556 at 2706.962 kb on - strand, within Dsui_2556 at 2706.965 kb on - strand, within Dsui_2556
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 2,704,815 + Dsui_2553 0.29 +0.7 2,704,855 + Dsui_2553 0.33 +0.7 2,704,864 - Dsui_2553 0.34 -1.0 2,704,869 - Dsui_2553 0.34 -2.1 2,705,024 - Dsui_2553 0.48 -0.4 2,705,077 + Dsui_2553 0.53 +0.3 2,705,335 + Dsui_2553 0.77 +0.2 2,705,527 - -2.5 2,705,577 + +0.7 2,705,680 - -0.3 2,705,681 - -1.9 2,705,753 - Dsui_2554 0.16 -0.1 2,705,824 + Dsui_2554 0.43 +0.7 2,705,894 + Dsui_2554 0.70 -2.4 2,705,939 + -0.9 2,706,007 + Dsui_2555 0.19 +0.7 2,706,015 - Dsui_2555 0.23 -0.1 2,706,043 - Dsui_2555 0.37 -0.3 2,706,146 - Dsui_2555 0.89 -0.1 2,706,170 + +2.3 2,706,516 - Dsui_2556 0.24 +0.7 2,706,542 - Dsui_2556 0.26 +0.7 2,706,542 - Dsui_2556 0.26 +0.1 2,706,542 - +0.7 2,706,598 - +0.7 2,706,666 - Dsui_2556 0.38 -0.6 2,706,701 + Dsui_2556 0.41 +0.7 2,706,737 - Dsui_2556 0.44 +0.4 2,706,757 + Dsui_2556 0.46 +0.7 2,706,896 - Dsui_2556 0.59 +2.7 2,706,962 - Dsui_2556 0.65 +0.7 2,706,965 - Dsui_2556 0.65 +0.7
Or see this region's nucleotide sequence