Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2111 and Dsui_2112 overlap by 26 nucleotides Dsui_2112 and Dsui_2113 are separated by 61 nucleotides Dsui_2113 and Dsui_2114 are separated by 2 nucleotides Dsui_2114 and Dsui_2115 are separated by 280 nucleotides
Dsui_2111: Dsui_2111 - cysteine desulfurase-like protein, SufS subfamily, at 2,235,829 to 2,237,721
_2111
Dsui_2112: Dsui_2112 - hypothetical protein, at 2,237,696 to 2,238,631
_2112
Dsui_2113: Dsui_2113 - serine acetyltransferase, at 2,238,693 to 2,239,691
_2113
Dsui_2114: Dsui_2114 - Rhodanese-related sulfurtransferase, at 2,239,694 to 2,240,236
_2114
Dsui_2115: Dsui_2115 - transcriptional regulator, at 2,240,517 to 2,241,470
_2115
Position (kb)
2238
2239
2240 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2237.698 kb on + strand at 2237.754 kb on + strand at 2237.880 kb on + strand at 2237.895 kb on + strand, within Dsui_2112 at 2237.895 kb on + strand at 2238.287 kb on - strand at 2238.297 kb on - strand at 2238.331 kb on + strand at 2238.396 kb on + strand at 2238.396 kb on + strand at 2238.511 kb on + strand at 2238.536 kb on + strand at 2238.706 kb on + strand at 2238.714 kb on - strand at 2238.796 kb on + strand, within Dsui_2113 at 2239.044 kb on - strand, within Dsui_2113 at 2239.143 kb on - strand at 2239.355 kb on - strand at 2239.440 kb on + strand at 2239.692 kb on + strand at 2240.165 kb on + strand, within Dsui_2114 at 2240.173 kb on - strand at 2240.309 kb on - strand at 2240.491 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 2,237,698 + -2.5 2,237,754 + +0.8 2,237,880 + -0.5 2,237,895 + Dsui_2112 0.21 -1.2 2,237,895 + +0.7 2,238,287 - +0.7 2,238,297 - +0.7 2,238,331 + +1.7 2,238,396 + +0.7 2,238,396 + +3.5 2,238,511 + +0.7 2,238,536 + +0.7 2,238,706 + -0.3 2,238,714 - +2.7 2,238,796 + Dsui_2113 0.10 -2.3 2,239,044 - Dsui_2113 0.35 +0.6 2,239,143 - -0.9 2,239,355 - -3.8 2,239,440 + +2.0 2,239,692 + -0.3 2,240,165 + Dsui_2114 0.87 -2.9 2,240,173 - +0.7 2,240,309 - +0.7 2,240,491 - +1.2
Or see this region's nucleotide sequence