Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2075 and Dsui_2076 are separated by 220 nucleotides Dsui_2076 and Dsui_2077 are separated by 96 nucleotides
Dsui_2075: Dsui_2075 - nucleotidyltransferase/DNA polymerase involved in DNA repair, at 2,193,620 to 2,194,783
_2075
Dsui_2076: Dsui_2076 - cytochrome c, mono- and diheme variants family, at 2,195,004 to 2,196,734
_2076
Dsui_2077: Dsui_2077 - cAMP-binding protein, at 2,196,831 to 2,198,312
_2077
Position (kb)
2195
2196
2197 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6 at 2194.178 kb on - strand, within Dsui_2075 at 2194.193 kb on - strand at 2194.534 kb on + strand at 2194.754 kb on + strand at 2194.787 kb on - strand at 2194.871 kb on + strand at 2194.903 kb on - strand at 2195.026 kb on + strand at 2195.482 kb on + strand at 2195.490 kb on - strand at 2195.565 kb on - strand at 2195.599 kb on - strand, within Dsui_2076 at 2195.872 kb on + strand, within Dsui_2076 at 2195.872 kb on + strand, within Dsui_2076 at 2195.880 kb on - strand at 2195.880 kb on - strand, within Dsui_2076 at 2195.882 kb on + strand at 2195.903 kb on + strand, within Dsui_2076 at 2196.011 kb on + strand, within Dsui_2076 at 2196.016 kb on + strand, within Dsui_2076 at 2196.019 kb on - strand at 2196.019 kb on - strand, within Dsui_2076 at 2196.215 kb on - strand at 2196.354 kb on - strand, within Dsui_2076 at 2196.410 kb on + strand at 2196.477 kb on - strand at 2196.479 kb on + strand, within Dsui_2076 at 2196.520 kb on + strand at 2196.591 kb on + strand at 2196.738 kb on + strand at 2196.738 kb on + strand at 2196.976 kb on - strand at 2196.976 kb on - strand at 2197.023 kb on + strand, within Dsui_2077 at 2197.071 kb on - strand, within Dsui_2077 at 2197.071 kb on - strand, within Dsui_2077 at 2197.143 kb on + strand, within Dsui_2077 at 2197.160 kb on + strand at 2197.344 kb on + strand at 2197.344 kb on + strand, within Dsui_2077 at 2197.428 kb on - strand at 2197.459 kb on + strand, within Dsui_2077
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 2,194,178 - Dsui_2075 0.48 +0.7 2,194,193 - +1.5 2,194,534 + -1.5 2,194,754 + -0.7 2,194,787 - -0.3 2,194,871 + +0.8 2,194,903 - +0.7 2,195,026 + +1.3 2,195,482 + +0.7 2,195,490 - +1.2 2,195,565 - +2.7 2,195,599 - Dsui_2076 0.34 +2.0 2,195,872 + Dsui_2076 0.50 +1.7 2,195,872 + Dsui_2076 0.50 +1.8 2,195,880 - +4.9 2,195,880 - Dsui_2076 0.51 +2.1 2,195,882 + +0.7 2,195,903 + Dsui_2076 0.52 +1.4 2,196,011 + Dsui_2076 0.58 +2.3 2,196,016 + Dsui_2076 0.58 +1.7 2,196,019 - +2.7 2,196,019 - Dsui_2076 0.59 +0.9 2,196,215 - +0.7 2,196,354 - Dsui_2076 0.78 +4.2 2,196,410 + +0.7 2,196,477 - +2.3 2,196,479 + Dsui_2076 0.85 +6.3 2,196,520 + +5.4 2,196,591 + +2.4 2,196,738 + +2.8 2,196,738 + +1.3 2,196,976 - +1.8 2,196,976 - +2.7 2,197,023 + Dsui_2077 0.13 +2.0 2,197,071 - Dsui_2077 0.16 +1.6 2,197,071 - Dsui_2077 0.16 +3.6 2,197,143 + Dsui_2077 0.21 +2.0 2,197,160 + +3.5 2,197,344 + +2.3 2,197,344 + Dsui_2077 0.35 +3.4 2,197,428 - +0.7 2,197,459 + Dsui_2077 0.42 +1.6
Or see this region's nucleotide sequence