Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1273 and Dsui_1274 are separated by 10 nucleotides Dsui_1274 and Dsui_1275 are separated by 36 nucleotides Dsui_1275 and Dsui_1276 are separated by 25 nucleotides Dsui_1276 and Dsui_1277 are separated by 14 nucleotides
Dsui_1273: Dsui_1273 - Rhodanese-related sulfurtransferase, at 1,336,585 to 1,336,998
_1273
Dsui_1274: Dsui_1274 - Glutaredoxin, GrxC family, at 1,337,009 to 1,337,275
_1274
Dsui_1275: Dsui_1275 - protein-export chaperone SecB, at 1,337,312 to 1,337,776
_1275
Dsui_1276: Dsui_1276 - hypothetical protein, at 1,337,802 to 1,338,275
_1276
Dsui_1277: Dsui_1277 - glycerol-3-phosphate dehydrogenase, at 1,338,290 to 1,339,285
_1277
Position (kb)
1337
1338
1339 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1336.980 kb on + strand at 1336.992 kb on + strand at 1336.992 kb on + strand at 1336.992 kb on + strand at 1336.992 kb on + strand at 1336.994 kb on + strand at 1337.023 kb on + strand at 1337.077 kb on + strand, within Dsui_1274 at 1337.077 kb on + strand, within Dsui_1274 at 1337.104 kb on + strand, within Dsui_1274 at 1337.163 kb on + strand, within Dsui_1274 at 1337.208 kb on + strand, within Dsui_1274 at 1337.225 kb on + strand, within Dsui_1274 at 1337.405 kb on + strand, within Dsui_1275 at 1337.603 kb on + strand, within Dsui_1275 at 1337.673 kb on + strand, within Dsui_1275 at 1337.794 kb on + strand at 1338.019 kb on + strand, within Dsui_1276 at 1338.050 kb on + strand, within Dsui_1276 at 1338.050 kb on + strand, within Dsui_1276 at 1338.174 kb on + strand, within Dsui_1276 at 1338.195 kb on + strand, within Dsui_1276 at 1338.276 kb on + strand at 1339.264 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 1,336,980 + -0.5 1,336,992 + +0.3 1,336,992 + -1.1 1,336,992 + -0.5 1,336,992 + +0.7 1,336,994 + -0.2 1,337,023 + -0.0 1,337,077 + Dsui_1274 0.25 +1.1 1,337,077 + Dsui_1274 0.25 +0.3 1,337,104 + Dsui_1274 0.36 +0.6 1,337,163 + Dsui_1274 0.58 +1.8 1,337,208 + Dsui_1274 0.75 -0.4 1,337,225 + Dsui_1274 0.81 +0.4 1,337,405 + Dsui_1275 0.20 -0.2 1,337,603 + Dsui_1275 0.63 -2.2 1,337,673 + Dsui_1275 0.78 -1.2 1,337,794 + -1.0 1,338,019 + Dsui_1276 0.46 +1.3 1,338,050 + Dsui_1276 0.52 +0.1 1,338,050 + Dsui_1276 0.52 +1.0 1,338,174 + Dsui_1276 0.78 -0.4 1,338,195 + Dsui_1276 0.83 -0.1 1,338,276 + -0.1 1,339,264 + +1.3
Or see this region's nucleotide sequence