Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0797 and Dsui_0798 are separated by 163 nucleotides Dsui_0798 and Dsui_0799 are separated by 174 nucleotides Dsui_0799 and Dsui_0800 are separated by 70 nucleotides Dsui_0800 and Dsui_0801 are separated by 231 nucleotides
Dsui_0797: Dsui_0797 - protein of unknown function (DUF1840), at 803,484 to 803,816
_0797
Dsui_0798: Dsui_0798 - carbonic anhydrase, at 803,980 to 804,636
_0798
Dsui_0799: Dsui_0799 - succinate CoA transferase, at 804,811 to 806,370
_0799
Dsui_0800: Dsui_0800 - hypothetical protein (DUF2059), at 806,441 to 806,956
_0800
Dsui_0801: Dsui_0801 - transcriptional regulator/sugar kinase, at 807,188 to 808,078
_0801
Position (kb) 804
805
806
807 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 803.857 kb on - strand at 803.876 kb on - strand at 803.889 kb on - strand at 803.913 kb on + strand at 803.921 kb on - strand at 803.923 kb on + strand at 803.923 kb on + strand at 803.931 kb on + strand at 804.007 kb on + strand at 804.012 kb on + strand at 804.012 kb on + strand at 804.017 kb on + strand at 804.032 kb on - strand at 804.081 kb on - strand, within Dsui_0798 at 804.150 kb on + strand, within Dsui_0798 at 804.198 kb on - strand, within Dsui_0798 at 804.212 kb on + strand, within Dsui_0798 at 804.222 kb on - strand, within Dsui_0798 at 804.233 kb on - strand, within Dsui_0798 at 804.258 kb on + strand, within Dsui_0798 at 804.264 kb on + strand, within Dsui_0798 at 804.301 kb on + strand, within Dsui_0798 at 804.312 kb on + strand, within Dsui_0798 at 804.320 kb on - strand, within Dsui_0798 at 804.328 kb on + strand, within Dsui_0798 at 804.348 kb on + strand, within Dsui_0798 at 804.381 kb on + strand, within Dsui_0798 at 804.389 kb on - strand, within Dsui_0798 at 804.437 kb on - strand, within Dsui_0798 at 804.493 kb on - strand, within Dsui_0798 at 804.504 kb on - strand, within Dsui_0798 at 804.519 kb on - strand, within Dsui_0798 at 804.530 kb on - strand, within Dsui_0798 at 804.530 kb on - strand, within Dsui_0798 at 804.535 kb on + strand, within Dsui_0798 at 804.572 kb on + strand at 804.635 kb on + strand at 804.771 kb on - strand at 804.810 kb on - strand at 804.838 kb on + strand at 804.860 kb on + strand at 804.928 kb on + strand at 804.933 kb on + strand at 804.933 kb on + strand at 804.941 kb on - strand at 804.966 kb on + strand at 805.031 kb on + strand, within Dsui_0799 at 805.104 kb on - strand, within Dsui_0799 at 805.196 kb on + strand, within Dsui_0799 at 805.196 kb on + strand, within Dsui_0799 at 805.196 kb on + strand, within Dsui_0799 at 805.204 kb on - strand, within Dsui_0799 at 805.208 kb on - strand at 805.239 kb on + strand, within Dsui_0799 at 805.272 kb on + strand, within Dsui_0799 at 805.315 kb on + strand, within Dsui_0799 at 805.386 kb on + strand, within Dsui_0799 at 805.501 kb on + strand, within Dsui_0799 at 805.509 kb on - strand, within Dsui_0799 at 805.526 kb on - strand, within Dsui_0799 at 805.564 kb on - strand, within Dsui_0799 at 805.681 kb on + strand, within Dsui_0799 at 805.696 kb on + strand, within Dsui_0799 at 805.732 kb on + strand, within Dsui_0799 at 805.734 kb on + strand, within Dsui_0799 at 805.785 kb on - strand, within Dsui_0799 at 805.799 kb on + strand, within Dsui_0799 at 805.807 kb on - strand, within Dsui_0799 at 805.921 kb on + strand, within Dsui_0799 at 806.004 kb on - strand, within Dsui_0799 at 806.018 kb on - strand, within Dsui_0799 at 806.018 kb on - strand, within Dsui_0799 at 806.020 kb on - strand, within Dsui_0799 at 806.054 kb on - strand, within Dsui_0799 at 806.081 kb on + strand, within Dsui_0799 at 806.157 kb on + strand, within Dsui_0799 at 806.165 kb on - strand, within Dsui_0799 at 806.255 kb on + strand at 806.263 kb on - strand at 806.275 kb on + strand at 806.312 kb on - strand at 806.357 kb on - strand at 806.364 kb on + strand at 806.401 kb on - strand at 806.415 kb on - strand at 806.439 kb on + strand at 806.439 kb on + strand at 806.447 kb on - strand at 806.491 kb on - strand at 806.493 kb on + strand, within Dsui_0800 at 806.501 kb on - strand, within Dsui_0800 at 806.501 kb on - strand, within Dsui_0800 at 806.543 kb on + strand, within Dsui_0800 at 806.601 kb on - strand, within Dsui_0800 at 806.610 kb on + strand at 806.684 kb on + strand, within Dsui_0800 at 806.784 kb on + strand, within Dsui_0800 at 806.797 kb on - strand, within Dsui_0800 at 806.802 kb on + strand, within Dsui_0800 at 806.809 kb on - strand, within Dsui_0800 at 806.810 kb on - strand, within Dsui_0800 at 806.901 kb on + strand, within Dsui_0800 at 806.946 kb on + strand at 806.988 kb on - strand at 807.170 kb on - strand at 807.178 kb on + strand at 807.186 kb on - strand at 807.228 kb on - strand at 807.328 kb on - strand, within Dsui_0801 at 807.344 kb on + strand, within Dsui_0801
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 803,857 - -0.9 803,876 - -1.8 803,889 - -0.3 803,913 + +0.9 803,921 - -0.2 803,923 + -1.2 803,923 + +0.9 803,931 + +0.7 804,007 + +0.9 804,012 + -0.9 804,012 + -1.6 804,017 + -0.4 804,032 - -2.1 804,081 - Dsui_0798 0.15 -1.8 804,150 + Dsui_0798 0.26 -0.4 804,198 - Dsui_0798 0.33 +0.9 804,212 + Dsui_0798 0.35 +0.9 804,222 - Dsui_0798 0.37 -1.1 804,233 - Dsui_0798 0.39 -1.0 804,258 + Dsui_0798 0.42 -0.6 804,264 + Dsui_0798 0.43 -0.4 804,301 + Dsui_0798 0.49 -0.3 804,312 + Dsui_0798 0.51 +2.5 804,320 - Dsui_0798 0.52 -0.8 804,328 + Dsui_0798 0.53 +0.6 804,348 + Dsui_0798 0.56 -0.5 804,381 + Dsui_0798 0.61 +0.6 804,389 - Dsui_0798 0.62 -0.7 804,437 - Dsui_0798 0.70 -0.9 804,493 - Dsui_0798 0.78 -0.7 804,504 - Dsui_0798 0.80 +0.6 804,519 - Dsui_0798 0.82 +0.0 804,530 - Dsui_0798 0.84 -1.2 804,530 - Dsui_0798 0.84 -1.0 804,535 + Dsui_0798 0.84 +0.0 804,572 + +0.2 804,635 + -0.6 804,771 - -0.6 804,810 - -2.5 804,838 + -1.2 804,860 + -0.7 804,928 + -0.8 804,933 + -1.4 804,933 + +2.7 804,941 - -1.4 804,966 + -1.7 805,031 + Dsui_0799 0.14 -0.8 805,104 - Dsui_0799 0.19 -0.5 805,196 + Dsui_0799 0.25 -1.1 805,196 + Dsui_0799 0.25 -0.4 805,196 + Dsui_0799 0.25 -0.7 805,204 - Dsui_0799 0.25 -1.2 805,208 - +0.9 805,239 + Dsui_0799 0.27 -1.2 805,272 + Dsui_0799 0.30 -1.2 805,315 + Dsui_0799 0.32 -0.9 805,386 + Dsui_0799 0.37 -1.0 805,501 + Dsui_0799 0.44 -1.6 805,509 - Dsui_0799 0.45 -0.8 805,526 - Dsui_0799 0.46 +0.9 805,564 - Dsui_0799 0.48 -1.4 805,681 + Dsui_0799 0.56 -0.7 805,696 + Dsui_0799 0.57 -1.3 805,732 + Dsui_0799 0.59 -1.1 805,734 + Dsui_0799 0.59 -0.3 805,785 - Dsui_0799 0.62 -1.4 805,799 + Dsui_0799 0.63 +0.9 805,807 - Dsui_0799 0.64 -1.4 805,921 + Dsui_0799 0.71 -0.7 806,004 - Dsui_0799 0.76 -0.9 806,018 - Dsui_0799 0.77 -1.9 806,018 - Dsui_0799 0.77 +2.5 806,020 - Dsui_0799 0.78 -1.4 806,054 - Dsui_0799 0.80 -1.2 806,081 + Dsui_0799 0.81 -1.5 806,157 + Dsui_0799 0.86 +0.1 806,165 - Dsui_0799 0.87 -0.5 806,255 + +0.8 806,263 - -1.1 806,275 + -1.9 806,312 - -1.6 806,357 - -0.5 806,364 + -1.4 806,401 - -0.1 806,415 - -0.3 806,439 + -0.5 806,439 + -0.5 806,447 - -0.6 806,491 - +0.4 806,493 + Dsui_0800 0.10 -1.3 806,501 - Dsui_0800 0.12 +3.2 806,501 - Dsui_0800 0.12 +2.5 806,543 + Dsui_0800 0.20 +1.9 806,601 - Dsui_0800 0.31 +0.1 806,610 + -0.5 806,684 + Dsui_0800 0.47 -0.0 806,784 + Dsui_0800 0.66 +0.2 806,797 - Dsui_0800 0.69 +0.5 806,802 + Dsui_0800 0.70 +0.2 806,809 - Dsui_0800 0.71 +0.4 806,810 - Dsui_0800 0.72 +0.1 806,901 + Dsui_0800 0.89 +2.2 806,946 + +0.5 806,988 - +0.8 807,170 - -0.6 807,178 + -1.5 807,186 - +0.1 807,228 - -0.5 807,328 - Dsui_0801 0.16 +0.9 807,344 + Dsui_0801 0.18 +3.2
Or see this region's nucleotide sequence