Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0698 and Dsui_0699 are separated by 16 nucleotides Dsui_0699 and Dsui_0700 are separated by 121 nucleotides Dsui_0700 and Dsui_0701 are separated by 45 nucleotides Dsui_0701 and Dsui_0702 overlap by 32 nucleotides
Dsui_0698: Dsui_0698 - hypothetical protein, at 694,903 to 695,718
_0698
Dsui_0699: Dsui_0699 - hypothetical protein, at 695,735 to 696,406
_0699
Dsui_0700: Dsui_0700 - psiF repeat protein, at 696,528 to 696,842
_0700
Dsui_0701: Dsui_0701 - serine kinase of the HPr protein, regulates carbohydrate metabolism, at 696,888 to 697,823
_0701
Dsui_0702: Dsui_0702 - PTS IIA-like nitrogen-regulatory protein PtsN, at 697,792 to 698,277
_0702
Position (kb) 696
697 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 695.535 kb on - strand, within Dsui_0698 at 695.552 kb on + strand, within Dsui_0698 at 695.552 kb on + strand, within Dsui_0698 at 695.583 kb on - strand, within Dsui_0698 at 695.584 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.632 kb on + strand, within Dsui_0698 at 695.652 kb on - strand at 695.659 kb on + strand at 695.686 kb on + strand at 695.686 kb on + strand at 695.733 kb on - strand at 695.765 kb on - strand at 695.786 kb on - strand at 695.793 kb on + strand at 695.793 kb on + strand at 695.805 kb on + strand, within Dsui_0699 at 695.815 kb on + strand, within Dsui_0699 at 695.816 kb on + strand, within Dsui_0699 at 695.861 kb on - strand, within Dsui_0699 at 695.861 kb on - strand, within Dsui_0699 at 695.864 kb on + strand, within Dsui_0699 at 695.909 kb on + strand, within Dsui_0699 at 695.929 kb on - strand, within Dsui_0699 at 695.931 kb on - strand, within Dsui_0699 at 695.944 kb on + strand, within Dsui_0699 at 695.959 kb on - strand, within Dsui_0699 at 696.017 kb on + strand, within Dsui_0699 at 696.017 kb on + strand, within Dsui_0699 at 696.070 kb on - strand, within Dsui_0699 at 696.093 kb on - strand, within Dsui_0699 at 696.104 kb on + strand at 696.356 kb on - strand at 696.463 kb on - strand at 696.551 kb on - strand at 696.615 kb on - strand, within Dsui_0700 at 696.615 kb on - strand, within Dsui_0700 at 696.797 kb on + strand, within Dsui_0700 at 696.812 kb on + strand at 696.814 kb on - strand at 696.973 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 695,535 - Dsui_0698 0.77 +0.7 695,552 + Dsui_0698 0.80 -0.7 695,552 + Dsui_0698 0.80 -0.5 695,583 - Dsui_0698 0.83 +0.7 695,584 - Dsui_0698 0.83 +0.3 695,615 - Dsui_0698 0.87 -0.4 695,615 - Dsui_0698 0.87 -0.9 695,615 - Dsui_0698 0.87 -0.2 695,615 - Dsui_0698 0.87 +0.3 695,632 + Dsui_0698 0.89 +0.0 695,652 - -0.3 695,659 + +1.7 695,686 + -0.1 695,686 + +0.0 695,733 - +0.3 695,765 - -0.8 695,786 - +0.0 695,793 + +0.9 695,793 + +1.9 695,805 + Dsui_0699 0.10 -2.7 695,815 + Dsui_0699 0.12 +0.7 695,816 + Dsui_0699 0.12 +1.0 695,861 - Dsui_0699 0.19 +0.1 695,861 - Dsui_0699 0.19 -0.3 695,864 + Dsui_0699 0.19 +1.9 695,909 + Dsui_0699 0.26 -0.8 695,929 - Dsui_0699 0.29 -0.4 695,931 - Dsui_0699 0.29 -2.8 695,944 + Dsui_0699 0.31 -1.4 695,959 - Dsui_0699 0.33 -0.4 696,017 + Dsui_0699 0.42 +1.0 696,017 + Dsui_0699 0.42 -0.2 696,070 - Dsui_0699 0.50 +1.2 696,093 - Dsui_0699 0.53 -1.5 696,104 + +0.9 696,356 - -1.3 696,463 - -0.6 696,551 - -0.3 696,615 - Dsui_0700 0.28 -0.8 696,615 - Dsui_0700 0.28 -1.2 696,797 + Dsui_0700 0.85 +0.5 696,812 + +0.4 696,814 - -0.4 696,973 - -1.4
Or see this region's nucleotide sequence