Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0133 and Dsui_0134 are separated by 471 nucleotides Dsui_0134 and Dsui_0135 overlap by 1 nucleotides
Dsui_0133: Dsui_0133 - hypothetical protein, at 134,449 to 135,519
_0133
Dsui_0134: Dsui_0134 - negative regulator of beta-lactamase expression, at 135,991 to 136,563
_0134
Dsui_0135: Dsui_0135 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 136,563 to 137,936
_0135
Position (kb) 135
136
137 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 135.453 kb on - strand at 135.472 kb on + strand at 135.494 kb on + strand at 135.572 kb on + strand at 135.580 kb on - strand at 135.727 kb on + strand at 135.735 kb on - strand at 135.735 kb on - strand at 135.812 kb on - strand at 135.819 kb on - strand at 135.863 kb on + strand at 135.894 kb on + strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.924 kb on + strand at 135.926 kb on - strand at 135.926 kb on - strand at 135.932 kb on - strand at 135.932 kb on - strand at 135.947 kb on - strand at 136.005 kb on - strand at 136.007 kb on + strand at 136.007 kb on + strand at 136.015 kb on - strand at 136.015 kb on - strand at 136.023 kb on - strand at 136.068 kb on - strand, within Dsui_0134 at 136.073 kb on + strand, within Dsui_0134 at 136.081 kb on - strand, within Dsui_0134 at 136.129 kb on - strand, within Dsui_0134 at 136.152 kb on - strand at 136.185 kb on + strand, within Dsui_0134 at 136.260 kb on - strand, within Dsui_0134 at 136.260 kb on - strand, within Dsui_0134 at 136.270 kb on - strand, within Dsui_0134 at 136.299 kb on + strand at 136.378 kb on - strand, within Dsui_0134 at 136.384 kb on + strand, within Dsui_0134 at 136.445 kb on + strand, within Dsui_0134 at 136.456 kb on + strand, within Dsui_0134 at 136.489 kb on - strand, within Dsui_0134 at 136.518 kb on + strand at 136.601 kb on + strand at 136.668 kb on - strand at 136.709 kb on - strand, within Dsui_0135 at 136.771 kb on - strand, within Dsui_0135 at 136.783 kb on - strand, within Dsui_0135 at 136.793 kb on + strand, within Dsui_0135 at 136.811 kb on - strand, within Dsui_0135 at 136.811 kb on - strand, within Dsui_0135 at 136.811 kb on - strand, within Dsui_0135 at 136.938 kb on + strand, within Dsui_0135 at 137.100 kb on - strand, within Dsui_0135 at 137.102 kb on + strand, within Dsui_0135 at 137.155 kb on + strand, within Dsui_0135 at 137.221 kb on + strand, within Dsui_0135 at 137.229 kb on - strand, within Dsui_0135 at 137.322 kb on + strand, within Dsui_0135 at 137.350 kb on + strand, within Dsui_0135 at 137.412 kb on + strand, within Dsui_0135 at 137.420 kb on - strand, within Dsui_0135 at 137.454 kb on + strand, within Dsui_0135 at 137.515 kb on + strand at 137.526 kb on - strand, within Dsui_0135
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 135,453 - +1.9 135,472 + +0.9 135,494 + -0.1 135,572 + +1.9 135,580 - -0.4 135,727 + -1.8 135,735 - -0.3 135,735 - +0.9 135,812 - -0.7 135,819 - +0.9 135,863 + -2.4 135,894 + -1.2 135,902 - -0.6 135,902 - -0.1 135,902 - +0.9 135,902 - -0.9 135,902 - -0.5 135,924 + -1.4 135,926 - -0.5 135,926 - -0.2 135,932 - -0.6 135,932 - -0.6 135,947 - +0.6 136,005 - +0.9 136,007 + -1.2 136,007 + -1.0 136,015 - -1.3 136,015 - -2.0 136,023 - -0.6 136,068 - Dsui_0134 0.13 +0.9 136,073 + Dsui_0134 0.14 -3.0 136,081 - Dsui_0134 0.16 -2.6 136,129 - Dsui_0134 0.24 -2.2 136,152 - +0.9 136,185 + Dsui_0134 0.34 +1.9 136,260 - Dsui_0134 0.47 -1.6 136,260 - Dsui_0134 0.47 -1.9 136,270 - Dsui_0134 0.49 -2.4 136,299 + +0.9 136,378 - Dsui_0134 0.68 -1.0 136,384 + Dsui_0134 0.69 -2.0 136,445 + Dsui_0134 0.79 -0.1 136,456 + Dsui_0134 0.81 -0.8 136,489 - Dsui_0134 0.87 -0.8 136,518 + +0.9 136,601 + -0.0 136,668 - -0.6 136,709 - Dsui_0135 0.11 -3.0 136,771 - Dsui_0135 0.15 +0.8 136,783 - Dsui_0135 0.16 -0.2 136,793 + Dsui_0135 0.17 -0.7 136,811 - Dsui_0135 0.18 -1.7 136,811 - Dsui_0135 0.18 -0.9 136,811 - Dsui_0135 0.18 -0.6 136,938 + Dsui_0135 0.27 -3.1 137,100 - Dsui_0135 0.39 +0.6 137,102 + Dsui_0135 0.39 -1.5 137,155 + Dsui_0135 0.43 -0.1 137,221 + Dsui_0135 0.48 +2.5 137,229 - Dsui_0135 0.48 -0.7 137,322 + Dsui_0135 0.55 +0.9 137,350 + Dsui_0135 0.57 +1.5 137,412 + Dsui_0135 0.62 +0.4 137,420 - Dsui_0135 0.62 -0.3 137,454 + Dsui_0135 0.65 +0.5 137,515 + +0.9 137,526 - Dsui_0135 0.70 -0.4
Or see this region's nucleotide sequence