Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_99

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
103,529	+				-0.0
103,705	+		Pf1N1B4_98	0.18	-0.0
103,789	+		Pf1N1B4_98	0.27	-1.3
103,798	+		Pf1N1B4_98	0.28	-0.0
103,798	+		Pf1N1B4_98	0.28	-0.0
103,799	-		Pf1N1B4_98	0.28	+1.0
103,804	+		Pf1N1B4_98	0.29	-2.1
103,804	+		Pf1N1B4_98	0.29	-2.4
103,804	+		Pf1N1B4_98	0.29	-2.8
103,805	-		Pf1N1B4_98	0.29	-0.0
103,805	-		Pf1N1B4_98	0.29	-1.6
103,805	-		Pf1N1B4_98	0.29	-2.2
103,805	-		Pf1N1B4_98	0.29	-0.0
103,805	-				-1.8
103,834	+		Pf1N1B4_98	0.32	-2.5
103,993	+		Pf1N1B4_98	0.48	-0.0
103,993	+		Pf1N1B4_98	0.48	-1.8
103,993	+				-0.4
103,993	+		Pf1N1B4_98	0.48	-2.6
103,994	-		Pf1N1B4_98	0.48	-1.3
103,994	-		Pf1N1B4_98	0.48	-0.0
104,014	+		Pf1N1B4_98	0.50	-1.9
104,014	+		Pf1N1B4_98	0.50	-3.6
104,015	-		Pf1N1B4_98	0.51	-2.2
104,015	-		Pf1N1B4_98	0.51	-1.6
104,056	+		Pf1N1B4_98	0.55	-1.8
104,056	+				-3.9
104,056	+		Pf1N1B4_98	0.55	-0.0
104,057	-		Pf1N1B4_98	0.55	-1.6
104,116	+		Pf1N1B4_98	0.61	-0.0
104,159	-		Pf1N1B4_98	0.66	-0.0
104,191	+		Pf1N1B4_98	0.69	-0.0
104,191	+		Pf1N1B4_98	0.69	-1.9
104,191	+				-0.0
104,192	-		Pf1N1B4_98	0.69	-0.0
104,192	-		Pf1N1B4_98	0.69	-0.0
104,192	-		Pf1N1B4_98	0.69	-0.0
104,192	-		Pf1N1B4_98	0.69	-0.0
104,192	-		Pf1N1B4_98	0.69	-0.0
104,236	+		Pf1N1B4_98	0.74	-0.0
104,236	+		Pf1N1B4_98	0.74	-0.0
104,236	+		Pf1N1B4_98	0.74	-0.0
104,236	+		Pf1N1B4_98	0.74	-0.0
104,237	-		Pf1N1B4_98	0.74	-0.0
104,332	+		Pf1N1B4_98	0.84	-0.0
104,461	+				-0.0
104,485	+				-0.0
104,485	+				-2.0
104,512	-				-1.3
104,715	+		Pf1N1B4_99	0.20	-0.0
104,830	+		Pf1N1B4_99	0.31	-0.9
104,902	+		Pf1N1B4_99	0.38	-0.0
104,902	+		Pf1N1B4_99	0.38	-3.0
104,903	-		Pf1N1B4_99	0.38	-1.4
104,903	-				-0.0
105,020	-		Pf1N1B4_99	0.49	-0.0
105,192	+		Pf1N1B4_99	0.66	-1.0
105,192	+		Pf1N1B4_99	0.66	-2.5
105,255	+		Pf1N1B4_99	0.72	-0.0
105,268	+		Pf1N1B4_99	0.73	-0.3
105,268	+		Pf1N1B4_99	0.73	-0.0
105,269	-		Pf1N1B4_99	0.73	-2.0
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-0.0
105,301	+		Pf1N1B4_99	0.76	-1.7
105,302	-				-0.0
105,302	-		Pf1N1B4_99	0.76	-2.2
105,428	-				-1.3
105,657	+				-1.2
105,657	+				-2.5
105,657	+				-0.0
105,658	-				-1.9
105,791	-				-0.0
105,828	-				-0.0
105,828	-				-1.8
105,829	+				-0.0
105,830	-				-3.0
105,830	-				-1.9
105,833	+				-0.0
105,833	+				-0.0
105,833	+				-0.0
105,834	-				-0.0
105,834	-				-1.8
105,834	-				-0.0
105,834	-				-0.0
105,834	-				-1.9
105,834	-				-1.5
105,834	-				-0.0
105,834	-				-0.0
105,845	+				-0.0
105,846	-				-0.0
105,854	+				-0.2
105,885	+		Pf1N1B4_100	0.13	-1.1
105,885	+		Pf1N1B4_100	0.13	-0.0
105,885	+		Pf1N1B4_100	0.13	-0.0
105,886	-		Pf1N1B4_100	0.14	-0.0
106,226	+		Pf1N1B4_101	0.48	-2.9
106,226	+		Pf1N1B4_101	0.48	-0.0
106,227	-		Pf1N1B4_101	0.48	-1.8
106,293	+		Pf1N1B4_101	0.88	-0.5
106,424	+				-0.0
106,424	+				-0.0
106,424	+				-1.4
106,424	+				-0.0
106,428	-				-3.6
106,428	-				-1.2
106,501	+				-0.6
106,502	-				-0.0