Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_742

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
843,383	-				-0.1
843,383	-				-0.1
843,437	+				-0.1
843,437	+				-2.3
843,460	-				-0.1
843,595	-				-0.1
843,673	+				-2.2
843,674	-				-0.1
843,703	+				-0.1
843,726	+				-0.1
843,726	+				-0.1
843,742	+				-2.7
843,742	+				-0.1
843,792	-				-0.1
843,792	-				-0.1
843,823	-				-0.1
843,869	+				-1.3
843,869	+				-0.9
843,870	-				-2.1
843,919	+				-0.1
843,994	+				-0.1
844,132	-				-0.1
844,132	-				-0.1
844,135	+				-0.1
844,232	+				-0.1
844,233	-				-0.1
844,234	+				-0.1
844,234	+				-1.0
844,234	+				-0.1
844,234	+				-0.1
844,234	+				-0.1
844,234	+				-0.1
844,234	+				-2.9
844,234	+				-0.1
844,235	-				-0.1
844,235	-				-0.1
844,394	-				-3.2
844,394	-				-0.1
844,394	-				-0.1
844,483	+		Pf1N1B4_742	0.14	-3.0
844,483	+		Pf1N1B4_742	0.14	-5.0
844,483	+		Pf1N1B4_742	0.14	-3.0
844,484	-		Pf1N1B4_742	0.14	-5.3
844,501	-		Pf1N1B4_742	0.16	-0.1
844,579	+		Pf1N1B4_742	0.22	-0.1
844,579	+		Pf1N1B4_742	0.22	-0.1
844,580	-		Pf1N1B4_742	0.22	-0.1
844,580	-		Pf1N1B4_742	0.22	-4.5
844,594	+		Pf1N1B4_742	0.23	-0.1
844,594	+		Pf1N1B4_742	0.23	-0.1
844,595	-		Pf1N1B4_742	0.24	-0.1
844,595	-		Pf1N1B4_742	0.24	-0.1
844,595	-		Pf1N1B4_742	0.24	-0.1
844,598	+		Pf1N1B4_742	0.24	-0.1
844,599	-		Pf1N1B4_742	0.24	-4.6
844,599	-		Pf1N1B4_742	0.24	-5.3
844,599	-		Pf1N1B4_742	0.24	-6.5
844,599	-		Pf1N1B4_742	0.24	-0.1
844,599	-		Pf1N1B4_742	0.24	-0.1
844,726	+				-2.9
844,727	-		Pf1N1B4_742	0.34	-0.1
844,775	+		Pf1N1B4_742	0.38	-0.1
844,849	+		Pf1N1B4_742	0.44	-5.9
844,849	+		Pf1N1B4_742	0.44	-0.1
844,850	-		Pf1N1B4_742	0.44	-4.7
844,850	-		Pf1N1B4_742	0.44	-1.1
844,864	+		Pf1N1B4_742	0.46	-0.1
844,865	-		Pf1N1B4_742	0.46	-5.0
844,865	-		Pf1N1B4_742	0.46	-0.1
844,865	-		Pf1N1B4_742	0.46	-0.1
844,960	+		Pf1N1B4_742	0.54	-0.1
844,960	+		Pf1N1B4_742	0.54	-0.1
844,960	+		Pf1N1B4_742	0.54	-0.1
844,960	+		Pf1N1B4_742	0.54	-0.1
844,961	-		Pf1N1B4_742	0.54	-0.1
844,961	-		Pf1N1B4_742	0.54	-4.4
844,961	-		Pf1N1B4_742	0.54	-0.1
844,961	-		Pf1N1B4_742	0.54	-0.1
845,047	+		Pf1N1B4_742	0.61	-0.1
845,126	-		Pf1N1B4_742	0.67	-2.7
845,126	-		Pf1N1B4_742	0.67	-4.9
845,252	+		Pf1N1B4_742	0.78	-0.1
845,253	-		Pf1N1B4_742	0.78	-4.1
845,253	-		Pf1N1B4_742	0.78	-4.8
845,253	-		Pf1N1B4_742	0.78	-0.1
845,264	-		Pf1N1B4_742	0.78	-0.1
845,275	+		Pf1N1B4_742	0.79	-5.0
845,276	-		Pf1N1B4_742	0.79	-4.6
845,276	-				-0.1
845,344	+		Pf1N1B4_742	0.85	-3.9
845,345	-		Pf1N1B4_742	0.85	-0.1
845,345	-				-3.2
845,430	+				-5.9
845,431	-				-4.2
845,431	-				-2.2
845,431	-				-0.1
845,431	-				-0.1
845,431	-				-0.1
845,431	-				-4.9
845,431	-				-0.1
845,441	+				-0.1
845,441	+				-5.6
845,441	+				-0.1
845,441	+				-2.8
845,442	-				-0.1
845,442	-				-0.1
845,443	+				-0.1
845,443	+				-0.1
845,443	+				-0.1
845,443	+				-0.1
845,443	+				-0.1
845,443	+				-3.3
845,443	+				-0.1
845,443	+				-5.1
845,443	+				-0.1
845,443	+				-2.7
845,443	+				-6.3
845,443	+				-0.1
845,443	+				-4.5
845,443	+				-0.1
845,443	+				-0.1
845,443	+				-4.1
845,444	-				-0.1
845,444	-				-4.3
845,444	-				-5.4
845,444	-				-0.1
845,444	-				-0.1
845,444	-				-3.2
845,444	-				-0.1
845,444	-				-1.1
845,444	-				-3.4
845,444	-				-4.3
845,444	-				-0.1
845,447	+				-0.1
845,447	+				-2.1
845,447	+				-0.1
845,448	-				-0.1
845,494	+				-4.7
845,494	+				-3.5
845,514	+				-1.6
845,514	+				-4.0
845,514	+				-0.8
845,515	-				-4.0
845,515	-				-3.6
845,581	+				-3.6
845,586	+				-3.3
845,604	+				-0.1
845,605	-				-2.0
845,625	+				-1.1
845,625	+				-0.1
845,883	+		Pf1N1B4_743	0.25	-2.6
845,883	+		Pf1N1B4_743	0.25	-0.1
845,883	+		Pf1N1B4_743	0.25	-0.1
845,883	+		Pf1N1B4_743	0.25	-0.9
845,884	-		Pf1N1B4_743	0.25	-0.1
845,884	-		Pf1N1B4_743	0.25	-0.1
845,884	-		Pf1N1B4_743	0.25	-2.9
845,884	-		Pf1N1B4_743	0.25	-2.4
846,098	-		Pf1N1B4_743	0.49	-2.6
846,106	+		Pf1N1B4_743	0.50	-0.1
846,106	+		Pf1N1B4_743	0.50	-0.1
846,106	+		Pf1N1B4_743	0.50	-0.1
846,106	+		Pf1N1B4_743	0.50	-1.0
846,106	+		Pf1N1B4_743	0.50	-0.1
846,107	-		Pf1N1B4_743	0.50	-0.1
846,107	-		Pf1N1B4_743	0.50	-0.1
846,107	-		Pf1N1B4_743	0.50	-0.1
846,107	-		Pf1N1B4_743	0.50	-2.4
846,199	-		Pf1N1B4_743	0.60	-1.1