Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5519

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
271,496	+		Pf1N1B4_5518	0.61	-0.1
271,497	-		Pf1N1B4_5518	0.61	-0.1
271,537	-		Pf1N1B4_5518	0.65	-2.9
271,538	+		Pf1N1B4_5518	0.65	-0.1
271,826	-				-1.3
271,845	-				-2.5
272,045	-				-0.1
272,130	-				-0.1
272,130	-				-0.1
272,226	+				-0.1
272,260	-				-0.1
272,330	-				-0.1
272,331	+				-0.1
272,564	-				-2.7
272,564	-				-1.5
272,625	-		Pf1N1B4_5519	0.11	-0.1
272,780	-		Pf1N1B4_5519	0.25	-3.6
272,793	-		Pf1N1B4_5519	0.26	-0.1
273,029	+				-2.1
273,030	-		Pf1N1B4_5519	0.46	-0.1
273,225	+		Pf1N1B4_5519	0.63	-3.7
273,245	+		Pf1N1B4_5519	0.65	-0.1
273,406	-		Pf1N1B4_5519	0.78	-0.1
273,679	-				-1.7
273,791	-				-1.9
273,861	-				-1.4