Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4222

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
4,677,553	-				-0.0
4,677,604	+				-2.6
4,677,671	-				-0.8
4,677,831	+				-0.0
4,677,831	+				-1.4
4,677,835	+				-0.0
4,677,836	-				-2.5
4,677,978	+				-0.0
4,677,979	-				-0.0
4,678,073	+				-2.0
4,678,108	+				-0.0
4,678,108	+				-0.0
4,678,108	+				-0.0
4,678,108	+				-0.0
4,678,108	+				-1.0
4,678,108	+				-0.0
4,678,109	-				-3.2
4,678,126	+				-0.0
4,678,269	+				-0.0
4,678,270	-				-2.6
4,678,362	+				-0.0
4,678,497	+				-0.0
4,678,497	+				-0.0
4,678,497	+				+0.6
4,678,497	+				-0.0
4,678,498	-				-0.0
4,678,531	+				-3.1
4,678,604	-				-0.0
4,678,604	-				-0.8
4,678,846	+		Pf1N1B4_4222	0.38	-0.0
4,678,846	+		Pf1N1B4_4222	0.38	-0.0
4,679,011	+		Pf1N1B4_4222	0.57	-0.0
4,679,012	-		Pf1N1B4_4222	0.57	-0.0
4,679,027	-		Pf1N1B4_4222	0.59	-1.8
4,679,027	-		Pf1N1B4_4222	0.59	-0.8
4,679,027	-		Pf1N1B4_4222	0.59	-0.0
4,679,098	-		Pf1N1B4_4222	0.67	-0.0
4,679,230	+		Pf1N1B4_4222	0.83	-1.6
4,679,231	-				-2.0
4,679,234	+		Pf1N1B4_4222	0.83	-1.2
4,679,234	+		Pf1N1B4_4222	0.83	-0.0
4,679,235	-		Pf1N1B4_4222	0.83	-0.0
4,679,235	-		Pf1N1B4_4222	0.83	-1.2
4,679,290	+		Pf1N1B4_4222	0.90	-0.0
4,679,290	+		Pf1N1B4_4222	0.90	-0.0
4,679,291	-		Pf1N1B4_4222	0.90	-0.0
4,679,291	-		Pf1N1B4_4222	0.90	-1.7
4,679,291	-		Pf1N1B4_4222	0.90	+0.1
4,679,335	+				-0.0
4,679,336	-				-0.0
4,679,345	-				-2.2
4,679,347	+				-2.1
4,679,347	+				-0.0
4,679,347	+				-0.0
4,679,347	+				-0.0
4,679,348	-				-1.7
4,679,348	-				-3.9
4,679,348	-				-0.0
4,679,353	+				-1.3
4,679,377	+				-0.0
4,679,377	+				-0.0
4,679,501	+		Pf1N1B4_4223	0.13	-0.0
4,679,502	-				-2.7
4,679,734	+		Pf1N1B4_4223	0.39	-1.0
4,679,734	+		Pf1N1B4_4223	0.39	-0.9
4,679,807	+		Pf1N1B4_4223	0.47	-2.8
4,679,884	-				-0.0
4,679,933	+				-2.6
4,679,934	-		Pf1N1B4_4223	0.61	-0.0
4,679,934	-		Pf1N1B4_4223	0.61	-2.5
4,680,137	-		Pf1N1B4_4223	0.84	-0.0
4,680,244	-				-3.5
4,680,303	+				-0.0