Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2718

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
3,053,989	-		Pf1N1B4_2717	0.41	-3.7
3,053,989	-		Pf1N1B4_2717	0.41	-4.9
3,053,989	-		Pf1N1B4_2717	0.41	-0.0
3,053,989	-		Pf1N1B4_2717	0.41	-0.0
3,054,315	-				-0.0
3,054,347	+				-0.0
3,054,348	-				-0.0
3,054,348	-				-0.0
3,054,348	-				-0.0
3,054,348	-				-0.0
3,054,460	-		Pf1N1B4_2718	0.12	-0.0
3,054,460	-				-0.0
3,054,460	-		Pf1N1B4_2718	0.12	-2.7
3,054,460	-		Pf1N1B4_2718	0.12	-0.0
3,054,552	+		Pf1N1B4_2718	0.24	-0.0
3,054,552	+		Pf1N1B4_2718	0.24	-2.4
3,054,552	+		Pf1N1B4_2718	0.24	-0.0
3,054,553	-		Pf1N1B4_2718	0.25	-0.0
3,054,606	+		Pf1N1B4_2718	0.32	-0.0
3,054,606	+		Pf1N1B4_2718	0.32	-0.0
3,054,606	+		Pf1N1B4_2718	0.32	-0.0
3,054,607	-		Pf1N1B4_2718	0.32	-3.7
3,054,607	-		Pf1N1B4_2718	0.32	-4.2
3,054,607	-		Pf1N1B4_2718	0.32	-0.0
3,054,607	-		Pf1N1B4_2718	0.32	-0.0
3,054,620	+		Pf1N1B4_2718	0.34	-3.2
3,054,620	+		Pf1N1B4_2718	0.34	-0.0
3,054,620	+		Pf1N1B4_2718	0.34	-0.0
3,054,620	+		Pf1N1B4_2718	0.34	-5.1
3,054,620	+		Pf1N1B4_2718	0.34	-0.0
3,054,620	+		Pf1N1B4_2718	0.34	-0.0
3,054,620	+				-1.5
3,054,620	+		Pf1N1B4_2718	0.34	-0.0
3,054,621	-		Pf1N1B4_2718	0.34	-2.3
3,055,091	-				-0.0
3,055,117	+				-0.0
3,055,117	+				-3.2
3,055,161	+				-0.0
3,055,161	+				-0.0
3,055,161	+				-0.0
3,055,161	+				-2.6
3,055,161	+				-0.0
3,055,161	+				-3.2
3,055,161	+				-3.3
3,055,161	+				-1.0
3,055,161	+				-0.0
3,055,161	+				-1.6
3,055,161	+				-1.0
3,055,161	+				-0.0
3,055,161	+				-0.0
3,055,161	+				-0.0
3,055,161	+				-2.3
3,055,162	-				-0.0
3,055,162	-				-0.0
3,055,162	-				-0.0
3,055,162	-				-0.0
3,055,162	-				-4.1
3,055,165	+				-0.0
3,055,165	+				-0.0
3,055,165	+				-2.3
3,055,165	+				-2.3
3,055,165	+				-0.0
3,055,165	+				-0.0
3,055,165	+				-0.0
3,055,165	+				-0.0
3,055,165	+				-0.0
3,055,165	+				-0.0
3,055,166	-				-0.0
3,055,166	-				-1.4
3,055,166	-				-0.0
3,055,185	-				-2.1
3,055,231	+				-0.0
3,055,231	+				+1.8
3,055,232	-				-0.0
3,055,232	-				-0.0
3,055,360	+				-0.0
3,055,361	-				-0.0
3,055,410	+				-0.0
3,055,410	+				-0.7
3,055,410	+				-0.0
3,055,420	+				-3.1
3,055,420	+				-1.6
3,055,420	+				-0.0
3,055,420	+				-2.5
3,055,420	+				-1.5
3,055,420	+				-0.0
3,055,420	+				-0.0
3,055,421	-				-2.7
3,055,421	-				-0.0
3,055,421	-				-0.7
3,055,421	-				-1.8
3,055,421	-				-1.1
3,055,421	-				-1.4
3,055,421	-				-2.0
3,055,421	-				-1.6
3,055,421	-				-0.9
3,055,421	-				-1.4
3,055,421	-				-0.0
3,055,422	+				-0.0
3,055,423	-				-1.5
3,055,423	-				-1.9
3,055,443	-				-1.0
3,055,492	+				-0.0
3,055,492	+				-0.0
3,055,497	+				-0.0
3,055,497	+				-0.0
3,055,497	+				-0.0
3,055,498	-				-0.0
3,055,498	-				-1.0
3,055,498	-				-1.8
3,055,498	-				-0.0
3,055,523	+				-0.0
3,055,523	+				-3.5
3,055,524	-				-0.8
3,055,524	-				-0.0
3,055,524	-				-0.0
3,055,524	-				-1.1
3,055,524	-				-0.9
3,055,535	+				-1.7
3,055,535	+				-1.3
3,055,536	-				-0.0
3,055,541	+				-0.0
3,055,541	+				-0.0
3,055,596	+				-0.0
3,055,597	-				-0.0
3,055,597	-				-0.0
3,055,597	-				-0.0
3,055,704	+				-0.0
3,055,704	+				-0.0
3,055,705	-				-0.6
3,055,782	-				-0.0
3,055,920	+		Pf1N1B4_2719	0.13	-0.0
3,055,920	+		Pf1N1B4_2719	0.13	-0.0
3,055,920	+		Pf1N1B4_2719	0.13	-0.0
3,056,010	+		Pf1N1B4_2719	0.17	-0.0
3,056,010	+		Pf1N1B4_2719	0.17	-0.0
3,056,011	-		Pf1N1B4_2719	0.17	-0.0
3,056,011	-		Pf1N1B4_2719	0.17	-0.0
3,056,011	-				-0.0
3,056,055	+		Pf1N1B4_2719	0.19	-0.0
3,056,096	+		Pf1N1B4_2719	0.21	-0.0
3,056,096	+		Pf1N1B4_2719	0.21	-0.0
3,056,097	-		Pf1N1B4_2719	0.21	-1.1