Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2272

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
2,587,284	+		Pf1N1B4_2270	0.43	-0.0
2,587,284	+		Pf1N1B4_2270	0.43	-0.0
2,587,284	+		Pf1N1B4_2270	0.43	-0.0
2,587,285	-		Pf1N1B4_2270	0.43	-0.0
2,587,285	-		Pf1N1B4_2270	0.43	-1.8
2,587,332	-		Pf1N1B4_2270	0.51	-0.0
2,587,353	+		Pf1N1B4_2270	0.55	-0.0
2,587,354	-		Pf1N1B4_2270	0.55	-0.0
2,587,354	-		Pf1N1B4_2270	0.55	-0.0
2,587,501	+		Pf1N1B4_2270	0.80	-1.5
2,587,501	+		Pf1N1B4_2270	0.80	-0.0
2,587,501	+		Pf1N1B4_2270	0.80	-3.4
2,587,501	+		Pf1N1B4_2270	0.80	-1.9
2,587,501	+		Pf1N1B4_2270	0.80	-0.0
2,587,501	+		Pf1N1B4_2270	0.80	-0.0
2,587,502	-		Pf1N1B4_2270	0.80	-0.0
2,587,542	-		Pf1N1B4_2270	0.87	-0.0
2,587,542	-		Pf1N1B4_2270	0.87	-0.0
2,587,640	+				-0.0
2,587,640	+				-0.0
2,587,766	-				-0.0
2,587,825	+		Pf1N1B4_2271	0.17	-0.0
2,587,826	-		Pf1N1B4_2271	0.17	-0.0
2,587,826	-		Pf1N1B4_2271	0.17	-2.4
2,587,826	-		Pf1N1B4_2271	0.17	-2.0
2,587,826	-		Pf1N1B4_2271	0.17	-2.4
2,587,826	-		Pf1N1B4_2271	0.17	-0.0
2,588,070	+		Pf1N1B4_2271	0.74	-0.0
2,588,070	+		Pf1N1B4_2271	0.74	-0.0
2,588,070	+		Pf1N1B4_2271	0.74	-2.3
2,588,070	+		Pf1N1B4_2271	0.74	-0.0
2,588,071	-		Pf1N1B4_2271	0.74	-0.0
2,588,071	-		Pf1N1B4_2271	0.74	-2.0
2,588,071	-		Pf1N1B4_2271	0.74	-0.0
2,588,173	+				-0.0
2,588,174	-				-0.0
2,588,174	-				-0.0
2,588,174	-				-0.0
2,588,177	+				-0.0
2,588,177	+				-0.0
2,588,177	+				-2.2
2,588,177	+				-0.0
2,588,177	+				-3.9
2,588,177	+				-0.0
2,588,178	-				-0.0
2,588,178	-				-1.9
2,588,178	-				-1.5
2,588,178	-				-0.0
2,588,178	-				-0.0
2,588,238	-				-0.1
2,588,515	+		Pf1N1B4_2272	0.22	-5.2
2,588,530	-		Pf1N1B4_2272	0.23	-0.0
2,588,678	+		Pf1N1B4_2272	0.35	-2.7
2,588,678	+		Pf1N1B4_2272	0.35	-0.0
2,588,679	-		Pf1N1B4_2272	0.35	-0.0
2,588,679	-		Pf1N1B4_2272	0.35	-3.4
2,588,934	+		Pf1N1B4_2272	0.56	-5.3
2,588,935	-		Pf1N1B4_2272	0.56	-0.0
2,588,935	-		Pf1N1B4_2272	0.56	-0.0
2,588,935	-		Pf1N1B4_2272	0.56	-4.6
2,588,935	-				-4.3
2,588,940	+		Pf1N1B4_2272	0.57	-3.6
2,588,940	+		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,589,363	+				-0.0
2,589,363	+				-0.0
2,589,363	+				-0.0
2,589,451	+				-4.1
2,589,479	-				-4.6
2,589,573	+		Pf1N1B4_2273	0.64	-2.1
2,589,574	-		Pf1N1B4_2273	0.65	-1.2
2,589,594	+		Pf1N1B4_2273	0.82	-4.9
2,589,599	+		Pf1N1B4_2273	0.87	-0.0
2,589,599	+		Pf1N1B4_2273	0.87	-3.9
2,589,599	+		Pf1N1B4_2273	0.87	-0.0
2,589,599	+		Pf1N1B4_2273	0.87	-2.8
2,589,599	+		Pf1N1B4_2273	0.87	-2.6
2,589,599	+		Pf1N1B4_2273	0.87	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-				-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-2.3
2,589,600	-		Pf1N1B4_2273	0.88	-4.9
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,761	+				-2.0
2,589,762	-				-1.7
2,589,766	+				-0.0
2,589,953	+		Pf1N1B4_2274	0.20	-2.4
2,589,953	+		Pf1N1B4_2274	0.20	-0.6
2,589,953	+		Pf1N1B4_2274	0.20	-0.7
2,589,954	-		Pf1N1B4_2274	0.20	-1.9
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,590,059	-		Pf1N1B4_2274	0.27	-0.0
2,590,059	-		Pf1N1B4_2274	0.27	-1.7
2,590,216	+		Pf1N1B4_2274	0.39	-1.8