Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2209

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
2,521,910	+		Pf1N1B4_2208	0.64	-1.3
2,522,010	-		Pf1N1B4_2208	0.69	-0.0
2,522,042	+		Pf1N1B4_2208	0.70	-0.0
2,522,043	-		Pf1N1B4_2208	0.70	-0.0
2,522,279	+		Pf1N1B4_2208	0.81	-1.9
2,522,280	-		Pf1N1B4_2208	0.81	-0.8
2,522,280	-		Pf1N1B4_2208	0.81	-0.0
2,522,420	+		Pf1N1B4_2208	0.87	-0.0
2,522,421	-		Pf1N1B4_2208	0.87	-0.0
2,522,561	+				-0.0
2,522,660	-				-0.0
2,522,707	+				-0.0
2,522,707	+				-0.0
2,522,707	+				-0.0
2,522,707	+				-0.0
2,522,707	+				-0.8
2,522,708	-				-0.0
2,523,011	+				-2.0
2,523,011	+				-0.0
2,523,012	-				-3.4
2,523,012	-				-0.0
2,523,012	-				-2.0
2,523,012	-				-1.5
2,523,012	-				-0.0
2,523,225	+		Pf1N1B4_2209	0.23	-3.1
2,523,226	-		Pf1N1B4_2209	0.23	-0.0
2,523,226	-		Pf1N1B4_2209	0.23	-0.0
2,523,243	+		Pf1N1B4_2209	0.24	-3.9
2,523,244	-		Pf1N1B4_2209	0.24	-1.6
2,523,244	-		Pf1N1B4_2209	0.24	-0.0
2,523,249	+		Pf1N1B4_2209	0.25	-0.0
2,523,249	+		Pf1N1B4_2209	0.25	+1.0
2,523,250	-		Pf1N1B4_2209	0.25	-2.8
2,523,250	-		Pf1N1B4_2209	0.25	-3.0
2,523,250	-		Pf1N1B4_2209	0.25	-3.2
2,523,474	+		Pf1N1B4_2209	0.40	-0.0
2,523,474	+		Pf1N1B4_2209	0.40	-1.0
2,523,475	-		Pf1N1B4_2209	0.40	-3.3
2,523,475	-		Pf1N1B4_2209	0.40	-2.0
2,523,810	+		Pf1N1B4_2209	0.62	-0.0
2,523,810	+		Pf1N1B4_2209	0.62	-0.0
2,523,810	+		Pf1N1B4_2209	0.62	-2.0
2,523,811	-		Pf1N1B4_2209	0.62	-0.0
2,523,855	+		Pf1N1B4_2209	0.65	-1.0
2,523,856	-		Pf1N1B4_2209	0.65	-3.2
2,523,856	-		Pf1N1B4_2209	0.65	-2.3
2,523,867	+		Pf1N1B4_2209	0.66	-2.6
2,523,867	+		Pf1N1B4_2209	0.66	-1.0
2,523,867	+		Pf1N1B4_2209	0.66	-0.0
2,523,867	+		Pf1N1B4_2209	0.66	-2.0
2,523,867	+		Pf1N1B4_2209	0.66	-0.0
2,523,867	+		Pf1N1B4_2209	0.66	-0.0
2,523,867	+		Pf1N1B4_2209	0.66	-0.0
2,523,868	-		Pf1N1B4_2209	0.66	-1.0
2,524,008	+		Pf1N1B4_2209	0.75	-0.0
2,524,009	-		Pf1N1B4_2209	0.75	-1.6
2,524,009	-		Pf1N1B4_2209	0.75	-2.3
2,524,151	-		Pf1N1B4_2209	0.85	-1.6
2,524,512	+				-0.0
2,524,548	+				-0.0
2,524,548	+				-1.4
2,524,549	-				-2.5
2,524,656	+				-1.1
2,524,656	+				-0.0
2,524,656	+				-1.4
2,524,657	-				-0.0
2,524,657	-				-0.0
2,524,657	-				-2.1
2,524,657	-				-0.0
2,525,131	+		Pf1N1B4_2210	0.73	-0.0
2,525,132	-		Pf1N1B4_2210	0.73	-0.0
2,525,132	-				-0.0
2,525,293	+				-0.0
2,525,293	+				-2.3
2,525,293	+				-0.0
2,525,293	+				-1.6
2,525,293	+				-0.0
2,525,293	+				-0.0
2,525,294	-				-0.0
2,525,294	-				-0.0
2,525,294	-				-0.0
2,525,294	-				-0.0
2,525,294	-				-1.4
2,525,294	-				-0.0
2,525,294	-				-0.0
2,525,297	+				-0.0
2,525,297	+				-3.9
2,525,297	+				-0.0
2,525,298	-				-1.8
2,525,298	-				-0.0
2,525,298	-				-2.3
2,525,298	-				-0.0
2,525,298	-				-0.0
2,525,298	-				-2.9
2,525,298	-				-0.0
2,525,298	-				-1.8
2,525,298	-				-0.0
2,525,298	-				-0.0
2,525,315	+				-0.0
2,525,315	+				-0.0
2,525,315	+				-0.0
2,525,316	-				-2.3
2,525,316	-				-0.0
2,525,316	-				-2.5
2,525,316	-				-3.1
2,525,369	+				-2.8