Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1731

Experiment: Nitrate reduction, replicate B t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t2
1,977,821	+		Pf1N1B4_1730	0.52	-0.0
1,977,821	+		Pf1N1B4_1730	0.52	-0.0
1,977,842	+		Pf1N1B4_1730	0.54	-0.0
1,977,843	-		Pf1N1B4_1730	0.54	-0.0
1,978,211	+		Pf1N1B4_1730	0.85	-0.0
1,978,363	-				-1.7
1,978,363	-				-2.6
1,978,484	+				-1.5
1,978,484	+				-2.2
1,978,484	+				-2.1
1,978,484	+				-0.0
1,978,484	+				-0.0
1,978,559	+				-0.0
1,978,677	-				-0.0
1,978,710	+				-2.5
1,978,713	+				-1.8
1,978,713	+				-0.8
1,978,714	-				-1.6
1,978,714	-				-2.8
1,978,714	-				-1.0
1,978,721	+				-1.3
1,978,722	-				-0.0
1,978,867	+		Pf1N1B4_1731	0.16	-1.6
1,978,867	+		Pf1N1B4_1731	0.16	-0.0
1,978,867	+		Pf1N1B4_1731	0.16	-0.1
1,978,867	+		Pf1N1B4_1731	0.16	-0.0
1,978,867	+		Pf1N1B4_1731	0.16	-2.4
1,978,868	-		Pf1N1B4_1731	0.16	-0.0
1,978,868	-		Pf1N1B4_1731	0.16	-5.6
1,978,868	-		Pf1N1B4_1731	0.16	-1.1
1,978,894	+		Pf1N1B4_1731	0.19	-1.7
1,978,894	+		Pf1N1B4_1731	0.19	-2.4
1,978,894	+		Pf1N1B4_1731	0.19	-1.9
1,978,894	+		Pf1N1B4_1731	0.19	-0.0
1,978,894	+		Pf1N1B4_1731	0.19	-0.0
1,978,895	-		Pf1N1B4_1731	0.19	-0.0
1,978,909	+		Pf1N1B4_1731	0.21	-1.0
1,978,910	-		Pf1N1B4_1731	0.21	-0.0
1,978,954	+		Pf1N1B4_1731	0.25	-0.0
1,978,954	+		Pf1N1B4_1731	0.25	-1.0
1,978,955	-		Pf1N1B4_1731	0.25	-0.0
1,978,955	-		Pf1N1B4_1731	0.25	-0.0
1,978,955	-		Pf1N1B4_1731	0.25	-0.2
1,978,996	+		Pf1N1B4_1731	0.29	-0.0
1,978,997	-		Pf1N1B4_1731	0.29	-0.0
1,979,205	-		Pf1N1B4_1731	0.51	-0.0
1,979,205	-		Pf1N1B4_1731	0.51	-1.3
1,979,205	-		Pf1N1B4_1731	0.51	-0.0
1,979,354	-		Pf1N1B4_1731	0.66	-1.3
1,979,535	-		Pf1N1B4_1731	0.84	-2.6
1,979,595	+		Pf1N1B4_1731	0.90	-2.1
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-2.1
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-1.2
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,595	+		Pf1N1B4_1731	0.90	-0.0
1,979,596	-				-0.0
1,979,596	-				-4.4
1,979,596	-				-0.0
1,979,596	-				-0.0
1,979,596	-				-1.5
1,979,596	-				-1.5
1,979,596	-				-0.0
1,979,596	-				-0.0
1,979,599	+				-1.6
1,979,599	+				-0.0
1,979,599	+				-1.9
1,979,600	-				-0.0
1,979,600	-				-0.0
1,979,600	-				-0.0
1,979,650	+				-3.3
1,979,651	-				-0.0
1,979,683	-				-0.0
1,979,754	-				-0.0
1,979,761	+				-0.0
1,979,761	+				-0.0
1,979,761	+				-0.0
1,979,762	-				-1.0
1,979,762	-				-0.0
1,979,762	-				-2.4
1,979,762	-				-0.0
1,979,762	-				-0.0
1,979,809	+				-2.2
1,979,829	+				-0.0
1,979,830	-				-0.0
1,979,974	-		Pf1N1B4_1732	0.12	-0.0
1,979,995	-		Pf1N1B4_1732	0.14	-0.0
1,980,061	-		Pf1N1B4_1732	0.19	-2.2
1,980,061	-		Pf1N1B4_1732	0.19	-2.2
1,980,083	+		Pf1N1B4_1732	0.21	-0.0
1,980,083	+		Pf1N1B4_1732	0.21	-0.0
1,980,083	+		Pf1N1B4_1732	0.21	-0.0
1,980,083	+		Pf1N1B4_1732	0.21	-1.5
1,980,083	+		Pf1N1B4_1732	0.21	-1.2
1,980,084	-		Pf1N1B4_1732	0.21	-2.2
1,980,084	-		Pf1N1B4_1732	0.21	-0.0
1,980,084	-		Pf1N1B4_1732	0.21	-1.7
1,980,192	+		Pf1N1B4_1732	0.30	-2.6
1,980,193	-		Pf1N1B4_1732	0.30	-0.0
1,980,240	+		Pf1N1B4_1732	0.34	-0.0
1,980,283	-		Pf1N1B4_1732	0.37	-1.4
1,980,451	+		Pf1N1B4_1732	0.51	-1.0
1,980,451	+		Pf1N1B4_1732	0.51	-2.2
1,980,452	-		Pf1N1B4_1732	0.51	-1.4
1,980,452	-		Pf1N1B4_1732	0.51	-1.5
1,980,517	+		Pf1N1B4_1732	0.57	-2.8
1,980,517	+		Pf1N1B4_1732	0.57	-0.0
1,980,518	-		Pf1N1B4_1732	0.57	-3.5
1,980,518	-		Pf1N1B4_1732	0.57	-1.8
1,980,588	+		Pf1N1B4_1732	0.63	-2.4
1,980,589	-		Pf1N1B4_1732	0.63	-2.3
1,980,589	-		Pf1N1B4_1732	0.63	-0.0
1,980,589	-		Pf1N1B4_1732	0.63	-0.0
1,980,589	-		Pf1N1B4_1732	0.63	-0.0