Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1781 and Dsui_1782 are separated by 36 nucleotides Dsui_1782 and Dsui_1783 are separated by 89 nucleotides
Dsui_1781: Dsui_1781 - flagellar capping protein, at 1,871,205 to 1,872,542
_1781
Dsui_1782: Dsui_1782 - flagellar protein FlaG, at 1,872,579 to 1,872,980
_1782
Dsui_1783: Dsui_1783 - flagellin/flagellar hook associated protein, at 1,873,070 to 1,873,924
_1783
Position (kb)
1872
1873 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1871.627 kb on + strand at 1871.646 kb on - strand, within Dsui_1781 at 1871.659 kb on - strand, within Dsui_1781 at 1871.665 kb on + strand, within Dsui_1781 at 1871.665 kb on + strand, within Dsui_1781 at 1871.666 kb on - strand, within Dsui_1781 at 1871.667 kb on - strand, within Dsui_1781 at 1871.667 kb on - strand, within Dsui_1781 at 1871.675 kb on - strand, within Dsui_1781 at 1871.682 kb on + strand, within Dsui_1781 at 1871.689 kb on + strand, within Dsui_1781 at 1871.697 kb on - strand, within Dsui_1781 at 1871.703 kb on + strand, within Dsui_1781 at 1871.713 kb on + strand, within Dsui_1781 at 1871.721 kb on - strand, within Dsui_1781 at 1871.761 kb on + strand at 1871.769 kb on - strand, within Dsui_1781 at 1871.796 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand at 1871.801 kb on + strand at 1871.801 kb on + strand, within Dsui_1781 at 1871.801 kb on + strand at 1871.804 kb on - strand, within Dsui_1781 at 1871.807 kb on + strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.809 kb on - strand, within Dsui_1781 at 1871.812 kb on + strand, within Dsui_1781 at 1871.855 kb on - strand, within Dsui_1781 at 1871.862 kb on - strand, within Dsui_1781 at 1871.871 kb on - strand, within Dsui_1781 at 1871.876 kb on + strand, within Dsui_1781 at 1871.876 kb on + strand, within Dsui_1781 at 1871.884 kb on - strand, within Dsui_1781 at 1871.903 kb on + strand at 1871.903 kb on + strand, within Dsui_1781 at 1871.903 kb on + strand, within Dsui_1781 at 1871.908 kb on + strand, within Dsui_1781 at 1871.911 kb on - strand, within Dsui_1781 at 1871.963 kb on - strand, within Dsui_1781 at 1871.963 kb on - strand, within Dsui_1781 at 1871.963 kb on - strand, within Dsui_1781 at 1871.987 kb on + strand, within Dsui_1781 at 1871.999 kb on + strand, within Dsui_1781 at 1872.055 kb on - strand, within Dsui_1781 at 1872.111 kb on - strand, within Dsui_1781 at 1872.176 kb on - strand, within Dsui_1781 at 1872.201 kb on + strand, within Dsui_1781 at 1872.229 kb on + strand, within Dsui_1781 at 1872.271 kb on - strand, within Dsui_1781 at 1872.307 kb on - strand, within Dsui_1781 at 1872.322 kb on + strand, within Dsui_1781 at 1872.339 kb on + strand, within Dsui_1781 at 1872.364 kb on - strand, within Dsui_1781 at 1872.391 kb on + strand, within Dsui_1781 at 1872.391 kb on + strand, within Dsui_1781 at 1872.417 kb on - strand at 1872.422 kb on - strand at 1872.466 kb on + strand at 1872.472 kb on + strand at 1872.472 kb on + strand at 1872.493 kb on + strand at 1872.512 kb on - strand at 1872.516 kb on + strand at 1872.517 kb on - strand at 1872.524 kb on - strand at 1872.594 kb on - strand at 1872.597 kb on + strand at 1872.597 kb on - strand at 1872.603 kb on + strand at 1872.614 kb on + strand at 1872.693 kb on - strand, within Dsui_1782 at 1872.700 kb on - strand, within Dsui_1782 at 1872.703 kb on + strand, within Dsui_1782 at 1872.711 kb on - strand, within Dsui_1782 at 1872.720 kb on - strand, within Dsui_1782 at 1872.744 kb on + strand, within Dsui_1782 at 1872.767 kb on - strand, within Dsui_1782 at 1872.778 kb on + strand, within Dsui_1782 at 1872.781 kb on + strand, within Dsui_1782 at 1872.781 kb on + strand, within Dsui_1782 at 1872.781 kb on + strand, within Dsui_1782 at 1872.870 kb on - strand, within Dsui_1782 at 1872.888 kb on + strand at 1872.936 kb on - strand, within Dsui_1782 at 1872.950 kb on + strand at 1872.960 kb on + strand at 1872.968 kb on - strand at 1872.997 kb on - strand at 1872.997 kb on - strand at 1873.005 kb on - strand at 1873.076 kb on - strand at 1873.076 kb on - strand at 1873.076 kb on - strand at 1873.076 kb on - strand at 1873.081 kb on - strand at 1873.092 kb on + strand at 1873.100 kb on - strand at 1873.100 kb on - strand at 1873.104 kb on + strand at 1873.104 kb on + strand at 1873.104 kb on + strand at 1873.104 kb on + strand at 1873.112 kb on - strand at 1873.112 kb on - strand at 1873.158 kb on - strand, within Dsui_1783 at 1873.163 kb on - strand, within Dsui_1783 at 1873.210 kb on - strand, within Dsui_1783 at 1873.240 kb on - strand, within Dsui_1783 at 1873.249 kb on - strand, within Dsui_1783 at 1873.265 kb on + strand, within Dsui_1783 at 1873.301 kb on + strand, within Dsui_1783 at 1873.336 kb on + strand, within Dsui_1783 at 1873.336 kb on - strand, within Dsui_1783 at 1873.403 kb on + strand, within Dsui_1783 at 1873.421 kb on + strand, within Dsui_1783 at 1873.424 kb on - strand, within Dsui_1783 at 1873.432 kb on + strand, within Dsui_1783 at 1873.440 kb on - strand, within Dsui_1783 at 1873.440 kb on - strand, within Dsui_1783 at 1873.457 kb on + strand, within Dsui_1783 at 1873.491 kb on - strand, within Dsui_1783 at 1873.608 kb on - strand, within Dsui_1783 at 1873.628 kb on + strand, within Dsui_1783 at 1873.675 kb on + strand, within Dsui_1783 at 1873.675 kb on + strand, within Dsui_1783 at 1873.755 kb on + strand, within Dsui_1783 at 1873.760 kb on + strand, within Dsui_1783 at 1873.760 kb on + strand, within Dsui_1783 at 1873.768 kb on - strand, within Dsui_1783 at 1873.768 kb on - strand, within Dsui_1783 at 1873.768 kb on - strand, within Dsui_1783 at 1873.786 kb on - strand, within Dsui_1783 at 1873.791 kb on + strand, within Dsui_1783 at 1873.791 kb on + strand, within Dsui_1783 at 1873.791 kb on + strand, within Dsui_1783 at 1873.798 kb on + strand, within Dsui_1783 at 1873.799 kb on - strand, within Dsui_1783 at 1873.806 kb on - strand, within Dsui_1783 at 1873.808 kb on + strand, within Dsui_1783 at 1873.808 kb on + strand, within Dsui_1783 at 1873.811 kb on - strand, within Dsui_1783 at 1873.811 kb on - strand, within Dsui_1783 at 1873.816 kb on - strand, within Dsui_1783 at 1873.819 kb on + strand, within Dsui_1783 at 1873.819 kb on + strand, within Dsui_1783 at 1873.819 kb on + strand, within Dsui_1783 at 1873.821 kb on + strand, within Dsui_1783 at 1873.821 kb on + strand, within Dsui_1783 at 1873.827 kb on - strand, within Dsui_1783 at 1873.827 kb on - strand, within Dsui_1783 at 1873.827 kb on - strand, within Dsui_1783 at 1873.829 kb on - strand, within Dsui_1783 at 1873.829 kb on - strand, within Dsui_1783 at 1873.840 kb on - strand at 1873.842 kb on + strand at 1873.842 kb on + strand at 1873.850 kb on - strand at 1873.858 kb on + strand at 1873.858 kb on + strand at 1873.858 kb on + strand at 1873.866 kb on - strand at 1873.866 kb on - strand at 1873.874 kb on + strand at 1873.901 kb on - strand at 1873.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 1,871,627 + +0.8 1,871,646 - Dsui_1781 0.33 -0.8 1,871,659 - Dsui_1781 0.34 -0.3 1,871,665 + Dsui_1781 0.34 +0.5 1,871,665 + Dsui_1781 0.34 -0.7 1,871,666 - Dsui_1781 0.34 -0.8 1,871,667 - Dsui_1781 0.35 +3.1 1,871,667 - Dsui_1781 0.35 -0.4 1,871,675 - Dsui_1781 0.35 +0.2 1,871,682 + Dsui_1781 0.36 +0.8 1,871,689 + Dsui_1781 0.36 +2.8 1,871,697 - Dsui_1781 0.37 +0.1 1,871,703 + Dsui_1781 0.37 -1.5 1,871,713 + Dsui_1781 0.38 -0.8 1,871,721 - Dsui_1781 0.39 -0.5 1,871,761 + +2.3 1,871,769 - Dsui_1781 0.42 -0.7 1,871,796 + Dsui_1781 0.44 +0.8 1,871,801 + Dsui_1781 0.45 -0.4 1,871,801 + Dsui_1781 0.45 +0.4 1,871,801 + +0.8 1,871,801 + Dsui_1781 0.45 +0.5 1,871,801 + Dsui_1781 0.45 +0.8 1,871,801 + Dsui_1781 0.45 -0.2 1,871,801 + Dsui_1781 0.45 +0.8 1,871,801 + Dsui_1781 0.45 +1.2 1,871,801 + -2.0 1,871,801 + Dsui_1781 0.45 +0.8 1,871,801 + Dsui_1781 0.45 +3.1 1,871,801 + Dsui_1781 0.45 +1.2 1,871,801 + Dsui_1781 0.45 +0.8 1,871,801 + Dsui_1781 0.45 +1.8 1,871,801 + Dsui_1781 0.45 -0.8 1,871,801 + Dsui_1781 0.45 -0.2 1,871,801 + +0.8 1,871,801 + Dsui_1781 0.45 +2.3 1,871,801 + Dsui_1781 0.45 +2.6 1,871,801 + Dsui_1781 0.45 -0.2 1,871,801 + Dsui_1781 0.45 +1.5 1,871,801 + Dsui_1781 0.45 +0.5 1,871,801 + +1.1 1,871,801 + +0.8 1,871,801 + Dsui_1781 0.45 +0.2 1,871,801 + +0.8 1,871,804 - Dsui_1781 0.45 -1.0 1,871,807 + Dsui_1781 0.45 -2.3 1,871,809 - Dsui_1781 0.45 -0.6 1,871,809 - Dsui_1781 0.45 +0.8 1,871,809 - Dsui_1781 0.45 +1.1 1,871,809 - Dsui_1781 0.45 -0.6 1,871,809 - Dsui_1781 0.45 -0.1 1,871,809 - Dsui_1781 0.45 +3.8 1,871,809 - Dsui_1781 0.45 -0.7 1,871,809 - Dsui_1781 0.45 -0.6 1,871,809 - Dsui_1781 0.45 -1.6 1,871,809 - Dsui_1781 0.45 -0.2 1,871,809 - Dsui_1781 0.45 +0.7 1,871,809 - Dsui_1781 0.45 +0.2 1,871,809 - Dsui_1781 0.45 +0.0 1,871,809 - Dsui_1781 0.45 +0.9 1,871,809 - Dsui_1781 0.45 +0.5 1,871,809 - Dsui_1781 0.45 +1.8 1,871,809 - Dsui_1781 0.45 +1.1 1,871,809 - Dsui_1781 0.45 +0.2 1,871,809 - Dsui_1781 0.45 +0.8 1,871,809 - Dsui_1781 0.45 -1.1 1,871,809 - Dsui_1781 0.45 +1.8 1,871,809 - Dsui_1781 0.45 +0.8 1,871,809 - Dsui_1781 0.45 -0.5 1,871,809 - Dsui_1781 0.45 +0.8 1,871,812 + Dsui_1781 0.45 +2.3 1,871,855 - Dsui_1781 0.49 +1.3 1,871,862 - Dsui_1781 0.49 -1.2 1,871,871 - Dsui_1781 0.50 -0.5 1,871,876 + Dsui_1781 0.50 -2.0 1,871,876 + Dsui_1781 0.50 +0.8 1,871,884 - Dsui_1781 0.51 -0.7 1,871,903 + +2.8 1,871,903 + Dsui_1781 0.52 +0.2 1,871,903 + Dsui_1781 0.52 +1.0 1,871,908 + Dsui_1781 0.53 +2.1 1,871,911 - Dsui_1781 0.53 +0.8 1,871,963 - Dsui_1781 0.57 -0.1 1,871,963 - Dsui_1781 0.57 -1.1 1,871,963 - Dsui_1781 0.57 -0.4 1,871,987 + Dsui_1781 0.58 +0.5 1,871,999 + Dsui_1781 0.59 -0.6 1,872,055 - Dsui_1781 0.64 -3.0 1,872,111 - Dsui_1781 0.68 +1.0 1,872,176 - Dsui_1781 0.73 -0.7 1,872,201 + Dsui_1781 0.74 -0.6 1,872,229 + Dsui_1781 0.77 -2.2 1,872,271 - Dsui_1781 0.80 -0.0 1,872,307 - Dsui_1781 0.82 -0.9 1,872,322 + Dsui_1781 0.83 -0.1 1,872,339 + Dsui_1781 0.85 -0.8 1,872,364 - Dsui_1781 0.87 -0.8 1,872,391 + Dsui_1781 0.89 -0.4 1,872,391 + Dsui_1781 0.89 -0.2 1,872,417 - -0.5 1,872,422 - +0.1 1,872,466 + -1.5 1,872,472 + +0.8 1,872,472 + -0.7 1,872,493 + +2.3 1,872,512 - -0.3 1,872,516 + -0.7 1,872,517 - -0.8 1,872,524 - -1.0 1,872,594 - -0.3 1,872,597 + +3.3 1,872,597 - -1.0 1,872,603 + -0.9 1,872,614 + -1.2 1,872,693 - Dsui_1782 0.28 -0.2 1,872,700 - Dsui_1782 0.30 +2.8 1,872,703 + Dsui_1782 0.31 +0.8 1,872,711 - Dsui_1782 0.33 -1.8 1,872,720 - Dsui_1782 0.35 -0.7 1,872,744 + Dsui_1782 0.41 -0.6 1,872,767 - Dsui_1782 0.47 -0.5 1,872,778 + Dsui_1782 0.50 -1.8 1,872,781 + Dsui_1782 0.50 +1.8 1,872,781 + Dsui_1782 0.50 -2.3 1,872,781 + Dsui_1782 0.50 -1.1 1,872,870 - Dsui_1782 0.72 -2.4 1,872,888 + +0.8 1,872,936 - Dsui_1782 0.89 +0.3 1,872,950 + +0.8 1,872,960 + -0.6 1,872,968 - -2.4 1,872,997 - +0.8 1,872,997 - -1.0 1,873,005 - +1.0 1,873,076 - +0.1 1,873,076 - -0.0 1,873,076 - -1.0 1,873,076 - -0.2 1,873,081 - -0.4 1,873,092 + +0.0 1,873,100 - +0.8 1,873,100 - -1.2 1,873,104 + -0.6 1,873,104 + -1.0 1,873,104 + -0.1 1,873,104 + -1.2 1,873,112 - -0.7 1,873,112 - +1.3 1,873,158 - Dsui_1783 0.10 -0.1 1,873,163 - Dsui_1783 0.11 -0.8 1,873,210 - Dsui_1783 0.16 -0.1 1,873,240 - Dsui_1783 0.20 -0.2 1,873,249 - Dsui_1783 0.21 -0.7 1,873,265 + Dsui_1783 0.23 -0.3 1,873,301 + Dsui_1783 0.27 +0.1 1,873,336 + Dsui_1783 0.31 +1.9 1,873,336 - Dsui_1783 0.31 -0.9 1,873,403 + Dsui_1783 0.39 +1.2 1,873,421 + Dsui_1783 0.41 +0.8 1,873,424 - Dsui_1783 0.41 -0.1 1,873,432 + Dsui_1783 0.42 -0.4 1,873,440 - Dsui_1783 0.43 +0.9 1,873,440 - Dsui_1783 0.43 -0.1 1,873,457 + Dsui_1783 0.45 +0.6 1,873,491 - Dsui_1783 0.49 +0.3 1,873,608 - Dsui_1783 0.63 -0.3 1,873,628 + Dsui_1783 0.65 +0.8 1,873,675 + Dsui_1783 0.71 -1.8 1,873,675 + Dsui_1783 0.71 +0.8 1,873,755 + Dsui_1783 0.80 -0.2 1,873,760 + Dsui_1783 0.81 -0.2 1,873,760 + Dsui_1783 0.81 +1.2 1,873,768 - Dsui_1783 0.82 -1.4 1,873,768 - Dsui_1783 0.82 +1.0 1,873,768 - Dsui_1783 0.82 -0.6 1,873,786 - Dsui_1783 0.84 -0.7 1,873,791 + Dsui_1783 0.84 -0.2 1,873,791 + Dsui_1783 0.84 +1.8 1,873,791 + Dsui_1783 0.84 +1.5 1,873,798 + Dsui_1783 0.85 +1.2 1,873,799 - Dsui_1783 0.85 -0.4 1,873,806 - Dsui_1783 0.86 -1.3 1,873,808 + Dsui_1783 0.86 -0.8 1,873,808 + Dsui_1783 0.86 -1.4 1,873,811 - Dsui_1783 0.87 -0.1 1,873,811 - Dsui_1783 0.87 +1.1 1,873,816 - Dsui_1783 0.87 +0.9 1,873,819 + Dsui_1783 0.88 +0.5 1,873,819 + Dsui_1783 0.88 -1.9 1,873,819 + Dsui_1783 0.88 -0.2 1,873,821 + Dsui_1783 0.88 -0.2 1,873,821 + Dsui_1783 0.88 -0.5 1,873,827 - Dsui_1783 0.89 +4.6 1,873,827 - Dsui_1783 0.89 +0.9 1,873,827 - Dsui_1783 0.89 +0.6 1,873,829 - Dsui_1783 0.89 -0.8 1,873,829 - Dsui_1783 0.89 -1.0 1,873,840 - -0.5 1,873,842 + +2.0 1,873,842 + -2.6 1,873,850 - +0.3 1,873,858 + -0.1 1,873,858 + +1.8 1,873,858 + +0.8 1,873,866 - -0.1 1,873,866 - -0.0 1,873,874 + +0.1 1,873,901 - +0.3 1,873,921 - -0.1
Or see this region's nucleotide sequence