Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1456 and Dsui_1457 are separated by 170 nucleotides Dsui_1457 and Dsui_1458 are separated by 101 nucleotides Dsui_1458 and Dsui_1459 are separated by 1 nucleotides
Dsui_1456: Dsui_1456 - HD-GYP domain-containing protein, at 1,515,104 to 1,516,692
_1456
Dsui_1457: Dsui_1457 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 1,516,863 to 1,517,258
_1457
Dsui_1458: Dsui_1458 - phosphohistidine phosphatase SixA, at 1,517,360 to 1,517,851
_1458
Dsui_1459: Dsui_1459 - hypothetical protein, at 1,517,853 to 1,519,376
_1459
Position (kb)
1517
1518 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1516.385 kb on - strand, within Dsui_1456 at 1516.432 kb on + strand, within Dsui_1456 at 1516.541 kb on + strand at 1516.541 kb on + strand at 1516.559 kb on - strand at 1516.667 kb on + strand at 1516.809 kb on - strand at 1516.882 kb on + strand at 1516.887 kb on + strand at 1517.071 kb on + strand, within Dsui_1457 at 1517.164 kb on - strand at 1517.318 kb on + strand at 1517.386 kb on + strand at 1517.407 kb on + strand at 1517.424 kb on + strand, within Dsui_1458 at 1517.467 kb on - strand, within Dsui_1458 at 1517.490 kb on + strand, within Dsui_1458 at 1517.574 kb on + strand, within Dsui_1458 at 1517.584 kb on + strand, within Dsui_1458 at 1517.585 kb on + strand, within Dsui_1458 at 1517.635 kb on + strand, within Dsui_1458 at 1517.668 kb on + strand, within Dsui_1458 at 1517.676 kb on - strand, within Dsui_1458 at 1517.691 kb on - strand, within Dsui_1458 at 1517.704 kb on + strand, within Dsui_1458 at 1517.928 kb on - strand at 1517.991 kb on - strand at 1518.337 kb on - strand, within Dsui_1459 at 1518.457 kb on - strand, within Dsui_1459 at 1518.560 kb on - strand, within Dsui_1459 at 1518.651 kb on + strand, within Dsui_1459 at 1518.689 kb on - strand, within Dsui_1459 at 1518.769 kb on + strand, within Dsui_1459 at 1518.777 kb on - strand, within Dsui_1459 at 1518.833 kb on + strand, within Dsui_1459
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 1,516,385 - Dsui_1456 0.81 +0.9 1,516,432 + Dsui_1456 0.84 +0.9 1,516,541 + -1.1 1,516,541 + +1.9 1,516,559 - +0.6 1,516,667 + +0.7 1,516,809 - -2.5 1,516,882 + -2.4 1,516,887 + +1.9 1,517,071 + Dsui_1457 0.53 -0.8 1,517,164 - +1.3 1,517,318 + -1.0 1,517,386 + +2.4 1,517,407 + -0.5 1,517,424 + Dsui_1458 0.13 -1.3 1,517,467 - Dsui_1458 0.22 +0.0 1,517,490 + Dsui_1458 0.26 +0.9 1,517,574 + Dsui_1458 0.43 -0.4 1,517,584 + Dsui_1458 0.46 +0.7 1,517,585 + Dsui_1458 0.46 +1.2 1,517,635 + Dsui_1458 0.56 +0.1 1,517,668 + Dsui_1458 0.63 -2.2 1,517,676 - Dsui_1458 0.64 +0.9 1,517,691 - Dsui_1458 0.67 -1.1 1,517,704 + Dsui_1458 0.70 +0.9 1,517,928 - -0.4 1,517,991 - +0.2 1,518,337 - Dsui_1459 0.32 +0.9 1,518,457 - Dsui_1459 0.40 +0.7 1,518,560 - Dsui_1459 0.46 +0.4 1,518,651 + Dsui_1459 0.52 +1.9 1,518,689 - Dsui_1459 0.55 +0.5 1,518,769 + Dsui_1459 0.60 -1.2 1,518,777 - Dsui_1459 0.61 +0.0 1,518,833 + Dsui_1459 0.64 +0.9
Or see this region's nucleotide sequence